RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 PAWRQ96IZ0 340 aaKnown RBP12.44□□□□□ -0.42
MCF2L-231ENST00000494043 TOX2Q96NM4 488 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 TUBGCP2Q9BSJ2 902 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 TCHPQ9BT92 498 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 TRIM5Q9C035 493 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 CDT1Q9H211 546 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 METTL14Q9HCE5 456 aaKnown RBP12.44□□□□□ -0.42
MCF2L-231ENST00000494043 KIAA1586Q9HCI6 787 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 IFNKQ9P0W0 207 aa12.44□□□□□ -0.42
MCF2L-231ENST00000494043 ARMCX3Q9UH62 379 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-231ENST00000494043 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 A0A1B0GUA9 196 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 LRRC10BA6NIK2 292 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 DCDC2CA8MYV0 355 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 OGTO15294 1046 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 FAM189A1O60320 539 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 RPS6KA5O75582 802 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 ADCY5O95622 1261 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 ADRB2P07550 413 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 TPM2P07951 284 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 MCF2P10911 925 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 HARSP12081 509 aaKnown RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 ZNF75DP51815 510 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 UBASH3AP57075 661 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 TLE2Q04725 743 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 SNRNP35Q16560 246 aaKnown RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 MAN2A1Q16706 1144 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 NOTUMQ6P988 496 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 CDR2LQ86X02 465 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 CBWD2Q8IUF1 395 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 CCDC51Q96ER9 411 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 NAP1L5Q96NT1 182 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 FAM213AQ9BRX8 229 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
MCF2L-231ENST00000494043 SQORQ9Y6N5 450 aa12.43□□□□□ -0.42
MCF2L-231ENST00000494043 KIAA0100Q14667 2235 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 LGALS16A8MUM7 142 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 TPM3P06753 285 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 GHRP10912 638 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 KRT13P13646 458 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 SELPP16109 830 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 PPP2R3AQ06190 1150 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 LPIN1Q14693 890 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 LRRC26Q2I0M4 334 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 DCAF4L1Q3SXM0 396 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 FILIP1LQ4L180 1135 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 MIIPQ5JXC2 388 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ZBTB41Q5SVQ8 909 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 SLC27A1Q6PCB7 646 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 APBB1IPQ7Z5R6 666 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 MRFAP1L1Q96HT8 127 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ADPGKQ9BRR6 497 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 NOC4LQ9BVI4 516 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 VPS16Q9H269 839 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ERVK-5Q9HDB9 667 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 INTS13Q9NVM9 706 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 PIN4Q9Y237 131 aaKnown RBP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
MCF2L-231ENST00000494043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.42□□□□□ -0.42
MCF2L-231ENST00000494043 ZNF233A6NK53 670 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 GPR182O15218 404 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 CD52P31358 61 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 ACOT2P49753 483 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 MCCD1P59942 119 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-231ENST00000494043 ENPEPQ07075 957 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 BFSP1Q12934 665 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 PAK2Q13177 524 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 VWA3BQ502W6 1294 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 DCAF17Q5H9S7 520 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-231ENST00000494043 UBE2Q1Q7Z7E8 422 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 MFSD14AQ96MC6 490 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 OSBPL7Q9BZF2 842 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 NDST4Q9H3R1 872 aa12.41□□□□□ -0.42
MCF2L-231ENST00000494043 AGO3Q9H9G7 860 aaKnown RBP12.41□□□□□ -0.42
MCF2L-231ENST00000494043 RBAKQ9NYW8 714 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-231ENST00000494043 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
MCF2L-231ENST00000494043 PES1O00541 588 aaKnown RBP12.4□□□□□ -0.42
MCF2L-231ENST00000494043 NPTXRO95502 500 aa12.4□□□□□ -0.42
MCF2L-231ENST00000494043 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
MCF2L-231ENST00000494043 EN2P19622 333 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-231ENST00000494043 CDC25BP30305 580 aa12.4□□□□□ -0.42
MCF2L-231ENST00000494043 TNFSF9P41273 254 aa12.4□□□□□ -0.42
MCF2L-231ENST00000494043 VAMP7P51809 220 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms