RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 U2AF1L4Q8WU68 220 aaKnown RBP11.53□□□□□ -0.56
CLCN6-208ENST00000494028 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 PSPC1Q8WXF1 523 aaKnown RBP11.53□□□□□ -0.56
CLCN6-208ENST00000494028 SHC3Q92529 594 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 CCDC127Q96BQ5 260 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 FAM84AQ96KN4 292 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 CAPZA3Q96KX2 299 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 OSBPL9Q96SU4 736 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 PNKPQ96T60 521 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 MMS19Q96T76 1030 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 CCDC94Q9BW85 323 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-208ENST00000494028 TARS2Q9BW92 718 aaKnown RBP11.53□□□□□ -0.56
CLCN6-208ENST00000494028 PDGFCQ9NRA1 345 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 NRBP2Q9NSY0 501 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 ARGLU1Q9NWB6 273 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-208ENST00000494028 KCNG1Q9UIX4 513 aa11.53□□□□□ -0.56
CLCN6-208ENST00000494028 RBM47A0AV96 593 aaKnown RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 ZRANB2O95218 330 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 FTCDO95954 541 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 H2AFZP0C0S5 128 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CCDC172P0C7W6 258 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 TXNP10599 105 aaKnown RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 PRLRP16471 622 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 SLC26A2P50443 739 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CLDN10P78369 228 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 C2orf54Q08AI8 447 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 GRB14Q14449 540 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 MAMDC4Q6UXC1 1216 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CRELD2Q6UXH1 353 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 H2AFVQ71UI9 128 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 USP37Q86T82 979 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CREG2Q8IUH2 290 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 LRRC57Q8N9N7 239 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 FBXL13Q8NEE6 735 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CAGE1Q8TC20 777 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 EPS8L1Q8TE68 723 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 COG1Q8WTW3 980 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 GLG1Q92896 1179 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 NT5C1BQ96P26 610 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CGRRF1Q99675 332 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 ARID3AQ99856 593 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 KIAA1586Q9HCI6 787 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 UBE2TQ9NPD8 197 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 ANKFY1Q9P2R3 1169 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 NOCTQ9UK39 431 aaKnown RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 AGO2Q9UKV8 859 aaKnown RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 RAB21Q9UL25 225 aa11.52□□□□□ -0.57
CLCN6-208ENST00000494028 PDCD11Q14690 1871 aaKnown RBP11.52□□□□□ -0.57
CLCN6-208ENST00000494028 A0A0B4J269 797 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF233A6NK53 670 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 TTLL13PA6NNM8 815 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 ABLIM1O14639 778 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 FAM189A1O60320 539 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 CELF2O95319 508 aaKnown RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 C22orf31O95567 290 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 LGALS2P05162 132 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 PRKCBP05771 671 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 DLATP10515 647 aaKnown RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 ITIH3Q06033 890 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 FAM110CQ1W6H9 321 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 ZACNQ401N2 412 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 MEI1Q5TIA1 1274 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 IER5Q5VY09 327 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 LMBRD2Q68DH5 695 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 SV2AQ7L0J3 742 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 GPR142Q7Z601 462 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 BRSK2Q8IWQ3 736 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 FAM71AQ8IYT1 594 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 LRRC71Q8N4P6 559 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 TPCN2Q8NHX9 752 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 TRAPPC12Q8WVT3 735 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 ZBTB45Q96K62 511 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 POP1Q99575 1024 aaKnown RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 AGPAT1Q99943 283 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 PARD6BQ9BYG5 372 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 RBAKQ9NYW8 714 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-208ENST00000494028 EHD2Q9NZN4 543 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 CNTNAP2Q9UHC6 1331 aa11.51□□□□□ -0.57
CLCN6-208ENST00000494028 CCDC151A5D8V7 595 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 K7ERI5 159 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 HBP1O60381 514 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 MSCO60682 206 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms