RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LCE2DQ5TA82 110 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-234ENST00000493923 TMCO3Q6UWJ1 677 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 AGMOQ6ZNB7 445 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 KRBA2Q6ZNG9 492 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 ZNF280BQ86YH2 543 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 RNF135Q8IUD6 432 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 FAM177A1Q8N128 213 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-234ENST00000493923 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 MICAL1Q8TDZ2 1067 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 SUSD6Q92537 303 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 CEP170P1Q96L14 293 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 FAM20AQ96MK3 541 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 ZNF558Q96NG5 402 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 S1PR5Q9H228 398 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 NRDE2Q9H7Z3 1164 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 DNAJB4Q9UDY4 337 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 PRKAG3Q9UGI9 489 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 PIN4Q9Y237 131 aaKnown RBP9.02□□□□□ -0.97
HDAC6-234ENST00000493923 COL4A3BPQ9Y5P4 624 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 DOCK6Q96HP0 2047 aa9.02□□□□□ -0.97
HDAC6-234ENST00000493923 C2orf71A6NGG8 1288 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 LOC730098B7Z3J9 87 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 F8W810 466 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 DCXO43602 365 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 DDHD2O94830 711 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 CPP00450 1065 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 P4HBP07237 508 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 GCFC2P16383 781 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 SP100P23497 879 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 YWHABP31946 246 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 KRT2P35908 639 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 SLC11A1P49279 550 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 GSCP56915 257 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 UBE3AQ05086 875 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 EMC2Q15006 297 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 XKR9Q5GH70 373 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 TWF2Q6IBS0 349 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 FBXO38Q6PIJ6 1188 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 SYT10Q6XYQ8 523 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 CATSPER4Q7RTX7 472 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 ZNF410Q86VK4 478 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 TPH2Q8IWU9 490 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 C4orf19Q8IY42 314 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 DIS3L2Q8IYB7 885 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 LRRC43Q8N309 656 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 C17orf53Q8N3J3 647 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 C12orf76Q8N812 135 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 SMG8Q8ND04 991 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 CPB2Q96IY4 423 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 TCF25Q9BQ70 676 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 EIF2AK1Q9BQI3 630 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 EIF2AQ9BY44 585 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 ENTPD7Q9NQZ7 604 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 AAASQ9NRG9 546 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 FAM105AQ9NUU6 356 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 TBC1D13Q9NVG8 400 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 MIOSQ9NXC5 875 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 SPG21Q9NZD8 308 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
HDAC6-234ENST00000493923 RRP15Q9Y3B9 282 aaKnown RBP9.01□□□□□ -0.97
HDAC6-234ENST00000493923 TBX3O15119 743 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 CLASP2O75122 1294 aaKnown RBP9□□□□□ -0.97
HDAC6-234ENST00000493923 ZC3H11AO75152 810 aaKnown RBP eCLIP9□□□□□ -0.97
HDAC6-234ENST00000493923 EOMESO95936 686 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 GALTP07902 379 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 PLA2G5P39877 138 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 TECP42680 631 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 POLGP54098 1239 aaPredicted RBP9□□□□□ -0.97
HDAC6-234ENST00000493923 AMHR2Q16671 573 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 NOMO2Q5JPE7 1267 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 ANKRD54Q6NXT1 300 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 HFE2Q6ZVN8 426 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 FERMT3Q86UX7 667 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 CDR2LQ86X02 465 aaPredicted RBP9□□□□□ -0.97
HDAC6-234ENST00000493923 CCDC83Q8IWF9 413 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 C10orf67Q8IYJ2 551 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 PIGOQ8TEQ8 1089 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 C16orf45Q96MC5 204 aaPredicted RBP9□□□□□ -0.97
HDAC6-234ENST00000493923 MTMR9Q96QG7 549 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 HSD17B14Q9BPX1 270 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 FUCA2Q9BTY2 467 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 TRAIPQ9BWF2 469 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 GBP3Q9H0R5 595 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 CXCL16Q9H2A7 254 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 POLD4Q9HCU8 107 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 GPRC5CQ9NQ84 441 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 CHST12Q9NRB3 414 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 AGPAT5Q9NUQ2 364 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 LZTS1Q9Y250 596 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 USP20Q9Y2K6 914 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 HES2Q9Y543 173 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 PCDHB2Q9Y5E7 798 aa9□□□□□ -0.97
HDAC6-234ENST00000493923 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 C2orf16Q68DN1 1984 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 B4GALT5O43286 388 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 HOXA2O43364 376 aa8.99□□□□□ -0.97
HDAC6-234ENST00000493923 ZNF623O75123 536 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms