RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 A0A0B4J269 797 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 AKAP3O75969 853 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 GARTP22102 1010 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 SNRPFP62306 86 aaKnown RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 PCBP1Q15365 356 aaKnown RBP eCLIP21.15■□□□□ 0.98
USP39-218ENST00000493829 TWF2Q6IBS0 349 aaKnown RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 DEFB128Q7Z7B8 93 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 C12orf56Q8IXR9 622 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 ZC3H3Q8IXZ2 948 aaKnown RBP21.15■□□□□ 0.98
USP39-218ENST00000493829 THNSL1Q8IYQ7 743 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 XXYLT1Q8NBI6 393 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 ADPGKQ9BRR6 497 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 THAP9Q9H5L6 903 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 STYXL1Q9Y6J8 313 aa21.15■□□□□ 0.98
USP39-218ENST00000493829 A0A1B0GUA9 196 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 ITGB8P26012 769 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 ACOT2P49753 483 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 PLCB2Q00722 1185 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 MCL1Q07820 350 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 GSE1Q14687 1217 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 NFIL3Q16649 462 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 CDKAL1Q5VV42 579 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 SLC27A1Q6PCB7 646 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 FOXR2Q6PJQ5 311 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 IRF2BP1Q8IU81 584 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 CBWD2Q8IUF1 395 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 CEP63Q96MT8 703 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 TMX1Q9H3N1 280 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 DMAC2Q9NW81 257 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 MAGEC2Q9UBF1 373 aaPredicted RBP21.14■□□□□ 0.97
USP39-218ENST00000493829 FRMD4BQ9Y2L6 1034 aa21.14■□□□□ 0.97
USP39-218ENST00000493829 KCNJ18B7U540 433 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 FGFR1OPO95684 399 aaKnown RBP21.13■□□□□ 0.97
USP39-218ENST00000493829 ADRB2P07550 413 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 AXLP30530 894 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 TNFSF9P41273 254 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 KCNJ12Q14500 433 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 GPNMBQ14956 572 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 SLC9A9Q8IVB4 645 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 FAM186BQ8IYM0 893 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 GPD1LQ8N335 351 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 USP38Q8NB14 1042 aa21.13■□□□□ 0.97
USP39-218ENST00000493829 TRIM6Q9C030 488 aaPredicted RBP21.13■□□□□ 0.97
USP39-218ENST00000493829 MGEA5O60502 916 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 EPB41P11171 864 aaKnown RBP21.12■□□□□ 0.97
USP39-218ENST00000493829 RAG1P15918 1043 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 CDK11BP21127 795 aaKnown RBP21.12■□□□□ 0.97
USP39-218ENST00000493829 SNRNP35Q16560 246 aaKnown RBP21.12■□□□□ 0.97
USP39-218ENST00000493829 TMEM192Q8IY95 271 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 APOL6Q9BWW8 343 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 HES2Q9Y543 173 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 KIAA0355O15063 1070 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 EXTL3O43909 919 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 MCF2P10911 925 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 ZNF18P17022 549 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 UBXN11Q5T124 520 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 FAM114A1Q8IWE2 563 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 NXF3Q9H4D5 531 aaKnown RBP21.12■□□□□ 0.97
USP39-218ENST00000493829 TAB2Q9NYJ8 693 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 SQORQ9Y6N5 450 aa21.12■□□□□ 0.97
USP39-218ENST00000493829 OGTO15294 1046 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 SLC16A3O15427 465 aaKnown RBP21.11■□□□□ 0.97
USP39-218ENST00000493829 FAM189A1O60320 539 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 TIMP1P01033 207 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 ZSCAN20P17040 1043 aaPredicted RBP21.11■□□□□ 0.97
USP39-218ENST00000493829 PSMC2P35998 433 aaKnown RBP21.11■□□□□ 0.97
USP39-218ENST00000493829 MTIF2P46199 727 aaKnown RBP21.11■□□□□ 0.97
USP39-218ENST00000493829 TCTN1Q2MV58 587 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 DCAF4L1Q3SXM0 396 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 TCP11X2Q5H9J9 407 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 FILIP1Q7Z7B0 1213 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 PRKAG2Q9UGJ0 569 aa21.11■□□□□ 0.97
USP39-218ENST00000493829 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
USP39-218ENST00000493829 MYBPC2Q14324 1141 aa21.1■□□□□ 0.97
USP39-218ENST00000493829 DCAF17Q5H9S7 520 aaPredicted RBP21.1■□□□□ 0.97
USP39-218ENST00000493829 CRELD2Q6UXH1 353 aaPredicted RBP21.1■□□□□ 0.97
USP39-218ENST00000493829 DBF4BQ8NFT6 615 aa21.1■□□□□ 0.97
USP39-218ENST00000493829 FAM212AQ96EL1 285 aa21.1■□□□□ 0.97
USP39-218ENST00000493829 ADAM2Q99965 735 aa21.1■□□□□ 0.97
USP39-218ENST00000493829 GRPEL1Q9HAV7 217 aa21.1■□□□□ 0.97
USP39-218ENST00000493829 RBAKQ9NYW8 714 aaPredicted RBP21.1■□□□□ 0.97
USP39-218ENST00000493829 STAG3L1P0CL83 205 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 SYN1P17600 705 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 KRT31Q15323 416 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 PLEKHG4Q58EX7 1191 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 APBB1IPQ7Z5R6 666 aaPredicted RBP21.09■□□□□ 0.97
USP39-218ENST00000493829 SEPT8Q92599 483 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 CCDC127Q96BQ5 260 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 CCDC51Q96ER9 411 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 HTATIP2Q9BUP3 242 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 ARMCX3Q9UH62 379 aaPredicted RBP21.09■□□□□ 0.97
USP39-218ENST00000493829 KIAA0391O15091 583 aaKnown RBP21.09■□□□□ 0.97
USP39-218ENST00000493829 EVI5O60447 810 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 GNA14O95837 355 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 TRIM49P0CI25 452 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 TRIM49CP0CI26 452 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 CXCL8P10145 99 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 PRKCSHP14314 528 aaPredicted RBP21.09■□□□□ 0.97
USP39-218ENST00000493829 CSF2RAP15509 400 aa21.09■□□□□ 0.97
USP39-218ENST00000493829 TCERG1LQ5VWI1 586 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms