RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 CDCA2Q69YH5 1023 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CCDC73Q6ZRK6 1079 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 ZNF598Q86UK7 904 aaKnown RBP11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 HACE1Q8IYU2 909 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 DAW1Q8N136 415 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 LRRC43Q8N309 656 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 FBXL6Q8N531 539 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 MYCT1Q8N699 235 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 URGCPQ8TCY9 931 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 LRRC15Q8TF66 581 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CCDC51Q96ER9 411 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CHAMP1Q96JM3 812 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 SPATA32Q96LK8 384 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CASD1Q96PB1 797 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 REEP2Q9BRK0 252 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 PLVAPQ9BX97 442 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 GBP3Q9H0R5 595 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 KCND2Q9NZV8 630 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 ZDHHC9Q9Y397 364 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 HES2Q9Y543 173 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 PCDHB12Q9Y5F1 795 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CNTNAP2Q9UHC6 1331 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 N4BP3O15049 544 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 PLS3P13797 630 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 LAG3P18627 525 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 DDIT3P35638 169 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 STRN3Q13033 797 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 NAALADL2Q58DX5 795 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 ARSHQ5FYA8 562 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 NOMO2Q5JPE7 1267 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 SLC27A1Q6PCB7 646 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 SV2BQ7L1I2 683 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 DYMQ7RTS9 669 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 CNNM3Q8NE01 707 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 DHX58Q96C10 678 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 ASIC4Q96FT7 647 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 PRIMPOLQ96LW4 560 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 ADPGKQ9BRR6 497 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 TRAIPQ9BWF2 469 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 MRPL9Q9BYD2 267 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 FZD8Q9H461 694 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 RNF19AQ9NV58 838 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 FAM86C1Q9NVL1 165 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 LARSQ9P2J5 1176 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 PARP2Q9UGN5 583 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 CD207Q9UJ71 328 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 ODF2LQ9ULJ1 636 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 RBM19Q9Y4C8 960 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 IPPQ9Y573 584 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 MYH11P35749 1972 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 DMDP11532 3685 aa11.45□□□□□ -0.58
TRAPPC12-222ENST00000493792 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 FNDC1Q4ZHG4 1894 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 DCHS1Q96JQ0 3298 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 PHLPP2Q6ZVD8 1323 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 ACKR2O00590 384 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 ZNF623O75123 536 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 HARSP12081 509 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 IDEP14735 1019 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 AVPR2P30518 371 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 VCPP55072 806 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 GIT2Q14161 759 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 FAM187BQ17R55 369 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 ATF7IP2Q5U623 682 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 AGMOQ6ZNB7 445 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 COLGALT1Q8NBJ5 622 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 P2RX5Q93086 422 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 BICD1Q96G01 975 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 FAM193BQ96PV7 902 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 TCHPQ9BT92 498 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 CCDC113Q9H0I3 377 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 NXF3Q9H4D5 531 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 PDZD7Q9H5P4 517 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 IGFLR1Q9H665 355 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 PARVGQ9HBI0 331 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 KCNG1Q9UIX4 513 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 PLAGL2Q9UPG8 496 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 KIAA1671Q9BY89 1806 aa11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 RIF1Q5UIP0 2472 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-222ENST00000493792 A0A087X0B3 334 aa11.43□□□□□ -0.58
TRAPPC12-222ENST00000493792 A0A1B0GUA9 196 aa11.43□□□□□ -0.58
TRAPPC12-222ENST00000493792 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
TRAPPC12-222ENST00000493792 H0YCG3 227 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms