RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 RAB20Q9NX57 234 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SOCS7O14512 581 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SORBS3O60504 671 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 GZMAP12544 262 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 CXCR5P32302 372 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 TCF7P36402 384 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SLC26A2P50443 739 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 GCNT1Q02742 428 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 C15orf39Q6ZRI6 1047 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 PLPPR4Q7Z2D5 763 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 TMEM143Q96AN5 459 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SELENOOQ9BVL4 669 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 ISCUQ9H1K1 167 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 ACBD3Q9H3P7 528 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 VIPAS39Q9H9C1 493 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 TXNRD2Q9NNW7 524 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 K7ERI5 159 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 PEX10O60683 326 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 TNFRSF8P28908 595 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 EFNA5P52803 228 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 MOB2Q70IA6 237 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SV2AQ7L0J3 742 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SEMA4DQ92854 862 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 GLTPD2A6NH11 291 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 ADCY3O60266 1144 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 IER5Q5VY09 327 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 PEX26Q7Z412 305 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 KREMEN1Q96MU8 473 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 GPR20Q99678 358 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 FAM213AQ9BRX8 229 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 NOCTQ9UK39 431 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 DIS3Q9Y2L1 958 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 LRRIQ4A6NIV6 560 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 ASB14A6NK59 587 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 ZPBP2Q6X784 338 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 CCNI2Q6ZMN8 369 aaPredicted RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 PSMB7Q99436 277 aa11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 TAF1DQ9H5J8 278 aaPredicted RBP11.65□□□□□ -0.54
PHACTR4-204ENST00000493669 RTN2O75298 545 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 ERVK-9P63128 1117 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 C8orf74Q6P047 294 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 NT5DC3Q86UY8 548 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 SLC35G2Q8TBE7 412 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 TAS1R2Q8TE23 839 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 ATP8B4Q8TF62 1192 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 HES6Q96HZ4 224 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 FNBP1Q96RU3 617 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 A0A0B4J269 797 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 NOP56O00567 594 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 TNNC1P63316 161 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 CCNA1P78396 465 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 PRPF4BQ13523 1007 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 CLUL1Q15846 466 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 LY6KQ17RY6 165 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 Q3C1V9 767 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 ZACNQ401N2 412 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 CCDC62Q6P9F0 684 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 DAAM2Q86T65 1068 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 RPUSD2Q8IZ73 545 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 RBM12Q9NTZ6 932 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 STIM2Q9P246 746 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 TMEM59LQ9UK28 342 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
PHACTR4-204ENST00000493669 KCNK3O14649 394 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 MTA2O94776 668 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 ZBTB48P10074 688 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 DLATP10515 647 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 CAPSQ13938 189 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 CASP8Q14790 479 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 CDCA2Q69YH5 1023 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 C11orf63Q6NUN7 778 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 RASGEF1CQ8N431 466 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 LRRC1Q9BTT6 524 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 C1orf112Q9NSG2 853 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 SEPT11Q9NVA2 429 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 TTC7AQ9ULT0 858 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 IGKV6-21A0A0C4DH24 114 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 ARIH2O95376 493 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 PGK2P07205 417 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 PDE6CP51160 858 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 AP3M2P53677 418 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms