RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PLCB3Q01970 1234 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MAP3K10Q02779 954 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MTHFD1LQ6UB35 978 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 TRIM72Q6ZMU5 477 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 RPAINQ86UA6 219 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 FBXL13Q8NEE6 735 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 DNAJB3Q8WWF6 145 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 ZNF668Q96K58 619 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 UROC1Q96N76 676 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 SPOCK3Q9BQ16 436 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 ZMYM2Q9UBW7 1377 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 EIF3CLB5ME19 914 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 VTNP04004 478 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 HSPA6P17066 643 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 CD58P19256 250 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 CLCN3P51790 818 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 PLD1Q13393 1074 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MYBPC2Q14324 1141 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MAPRE1Q15691 268 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 SNRNP35Q16560 246 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 GJC2Q5T442 439 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 C4orf50Q6ZRC1 276 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 NT5DC4Q86YG4 428 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 CLEC4DQ8WXI8 215 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MTMR9Q96QG7 549 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MYCBPQ99417 103 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 EIF3CQ99613 913 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 DDX50Q9BQ39 737 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 STK39Q9UEW8 545 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 USTQ9Y2C2 406 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MYH13Q9UKX3 1938 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 SART1O43290 800 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 MYBP10242 640 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MYBL1P10243 752 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 NPEPPSP55786 919 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 PRAMEF19Q5SWL8 479 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 C11orf57Q6ZUT1 292 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 GET4Q7L5D6 327 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 SLC51AQ86UW1 340 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MTMR8Q96EF0 704 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
NF1-215ENST00000493220 PORCNQ9H237 461 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 C11orf49Q9H6J7 331 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 TMEM134Q9H6X4 195 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 SLC8A2Q9UPR5 921 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MORC2Q9Y6X9 1032 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 FRMPD4Q14CM0 1322 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 OGTO15294 1046 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 FARP2O94887 1054 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 CALB1P05937 261 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 RALAP11233 206 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 ELNP15502 786 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 ATP2A2P16615 1042 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 PCSK1P29120 753 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 TOB1P50616 345 aaPredicted RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 BBS5Q8N3I7 341 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 TSEN34Q9BSV6 310 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 AMFRQ9UKV5 643 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 SLX4Q8IY92 1834 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 TAF1LQ8IZX4 1826 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 CTAGE15A4D2H0 777 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 LGALS16A8MUM7 142 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 A8MXQ7 604 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 CTAGE8P0CG41 777 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 OR1G1P47890 313 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 VEGFBP49765 207 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 TAF6P49848 677 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 KCNA1Q09470 495 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 PPIGQ13427 754 aaKnown RBP eCLIP6.74□□□□□ -1.331e-6■□□□□ 10.9
NF1-215ENST00000493220 PLCB4Q15147 1175 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 ZNF569Q5MCW4 686 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 TOGARAM2Q6ZUX3 1019 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 CTAGE6Q86UF2 777 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 CTAGE4Q8IX94 777 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 CCDC26Q8TAB7 109 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 INPP4AQ96PE3 977 aaPredicted RBP6.74□□□□□ -1.33
NF1-215ENST00000493220 G3BP2Q9UN86 482 aaKnown RBP6.74□□□□□ -1.33
NF1-215ENST00000493220 MYH2Q9UKX2 1941 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 A0A087WWV3 80 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 SMIM35A0A1B0GVV1 85 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 DYTNA2CJ06 578 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 MAFO75444 373 aaPredicted RBP6.74□□□□□ -1.33
NF1-215ENST00000493220 ZNF189O75820 626 aaPredicted RBP6.74□□□□□ -1.33
NF1-215ENST00000493220 SLITRK3O94933 977 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 H2AFZP0C0S5 128 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 NPTX2P47972 431 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 TM4SF4P48230 202 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 GCLMP48507 274 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 TERF1P54274 439 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 ZBED6P86452 979 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 EVX2Q03828 476 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 KCNH2Q12809 1159 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 GIT2Q14161 759 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 KRT31Q15323 416 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 SHROOM1Q2M3G4 852 aaPredicted RBP6.74□□□□□ -1.33
NF1-215ENST00000493220 ZNF280DQ6N043 979 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 DNAJC24Q6P3W2 148 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 SLC27A1Q6PCB7 646 aa6.74□□□□□ -1.33
NF1-215ENST00000493220 H2AFVQ71UI9 128 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms