RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ZNF148Q9UQR1 794 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SUGT1Q9Y2Z0 365 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PLCH1Q4KWH8 1693 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CYP3A7-CYP3A51PA0A087WV96 503 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PIK3R2O00459 728 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CYP3A7P24462 503 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TMED2Q15363 201 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 HVCN1Q96D96 273 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 OLFML3Q9NRN5 406 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 C1orf112Q9NSG2 853 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TELO2Q9Y4R8 837 aa16.29■□□□□ 0.2
TNFRSF1B-203ENST00000492361 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KRT19P08727 400 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RARAP10276 462 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KRT10P13645 584 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SCP2P22307 547 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PIK3CAP42336 1068 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RARRES1P49788 294 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RWDD2BP57060 319 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MAPK7Q13164 816 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DAW1Q8N136 415 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CCDC197Q8NCU1 140 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KIFAP3Q92845 792 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KRT15P19012 456 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ORC1Q13415 861 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TTC27Q6P3X3 843 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PRELID2Q8N945 189 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SUPT20HQ8NEM7 779 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MKL1Q969V6 931 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CHST7Q9NS84 486 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 FGFR1OP2Q9NVK5 253 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RRM1P23921 792 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 STX2P32856 288 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SPRED3Q2MJR0 410 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DCUN1D2Q6PH85 259 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RHOT2Q8IXI1 618 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SLC5A5Q92911 643 aa16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ARHGEF2Q92974 986 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SHOX2O60902 331 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 EN1Q05925 392 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ATP13A4Q4VNC1 1196 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SAMD7Q7Z3H4 446 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 XPO6Q96QU8 1125 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TMEM206Q9H813 350 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CHMP6Q96FZ7 201 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 HES6Q96HZ4 224 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ZBTB45Q96K62 511 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SYNCQ9H7C4 482 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ANAPC5Q9UJX4 755 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CEP83Q9Y592 693 aa16.27■□□□□ 0.2
TNFRSF1B-203ENST00000492361 O00370 1275 aa16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 ATF2P15336 505 aa16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 MARSP56192 900 aaKnown RBP16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 XIRP1Q702N8 1843 aaKnown RBP16.27■□□□□ 0.19
TNFRSF1B-203ENST00000492361 PRKCIP41743 596 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 POLGP54098 1239 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 SKOR1P84550 965 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 IFT74Q96LB3 600 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 NXF1Q9UBU9 619 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 TMX2Q9Y320 296 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 DDX3YO15523 660 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 SRGAP2CP0DJJ0 459 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 YY1P25490 414 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 GBP2P32456 591 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 NIM1KQ8IY84 436 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 PLVAPQ9BX97 442 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 SLC40A1Q9NP59 571 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 CCDC88AQ3V6T2 1871 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 PLS3P13797 630 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 CYP11B1P15538 503 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 NPTX2P47972 431 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 JAM2P57087 298 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 PTENP60484 403 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 KRT39Q6A163 491 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 CALR3Q96L12 384 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 KREMEN1Q96MU8 473 aa16.26■□□□□ 0.19
TNFRSF1B-203ENST00000492361 IDI2Q9BXS1 227 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms