RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 FOXQ1Q9C009 403 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 TRIM6Q9C030 488 aaPredicted RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 CHST7Q9NS84 486 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 FNIP2Q9P278 1114 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 VAV3Q9UKW4 847 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 SNX14Q9Y5W7 946 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 ZFP37Q9Y6Q3 630 aaPredicted RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 EP300Q09472 2414 aaPredicted RBP16.11■□□□□ 0.17
SSR4-212ENST00000491833 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 M0R2N6 131 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 DEXIO95424 95 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 YWHABP31946 246 aaKnown RBP16.11■□□□□ 0.17
SSR4-212ENST00000491833 SSRP1Q08945 709 aaKnown RBP16.11■□□□□ 0.17
SSR4-212ENST00000491833 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
SSR4-212ENST00000491833 INF2Q27J81 1249 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 KCNB2Q92953 911 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 CPB2Q96IY4 423 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 B3GALT6Q96L58 329 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 MTRQ99707 1265 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 CSRNP2Q9H175 543 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 WRAP73Q9P2S5 460 aaPredicted RBP16.11■□□□□ 0.17
SSR4-212ENST00000491833 ADAM28Q9UKQ2 775 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 GIT1Q9Y2X7 761 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 HES2Q9Y543 173 aa16.11■□□□□ 0.17
SSR4-212ENST00000491833 ZNF292O60281 2723 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 PATJQ8NI35 1801 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 POTEMA6NI47 508 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 INO80B-WBP1J3KQ70 363 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 ZMYND10O75800 440 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 FSHRP23945 695 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
SSR4-212ENST00000491833 STARD6P59095 220 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 GRIK3Q13003 919 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 OTUD6AQ7L8S5 288 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 C4orf19Q8IY42 314 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
SSR4-212ENST00000491833 DCLK2Q8N568 766 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 GPR62Q9BZJ7 368 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 NXF3Q9H4D5 531 aaKnown RBP16.1■□□□□ 0.17
SSR4-212ENST00000491833 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 MIOSQ9NXC5 875 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 DLL3Q9NYJ7 618 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 ZMYM2Q9UBW7 1377 aa16.1■□□□□ 0.17
SSR4-212ENST00000491833 DMXL1Q9Y485 3027 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 CPLX1O14810 134 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 SPTLC1O15269 473 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 GLULP15104 373 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 RPL17P18621 184 aaKnown RBP16.09■□□□□ 0.17
SSR4-212ENST00000491833 PSMA5P28066 241 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 HSPA4P34932 840 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 PTENP60484 403 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 TFDP1Q14186 410 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
SSR4-212ENST00000491833 XKR9Q5GH70 373 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 LIN9Q5TKA1 542 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 LILRA6Q6PI73 481 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 MTSS1LQ765P7 747 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 SUMF1Q8NBK3 374 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 ST13P5Q8NFI4 369 aaPredicted RBP16.09■□□□□ 0.17
SSR4-212ENST00000491833 FGF14Q92915 247 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 BCO2Q9BYV7 579 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 FBXW11Q9UKB1 542 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 CDH7Q9ULB5 785 aa16.09■□□□□ 0.17
SSR4-212ENST00000491833 SF3B1O75533 1304 aaKnown RBP eCLIP16.09■□□□□ 0.17
SSR4-212ENST00000491833 KANSL1LA0AUZ9 987 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 LAMTOR5O43504 91 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 LRRN2O75325 713 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 GCFC2P16383 781 aaKnown RBP16.08■□□□□ 0.16
SSR4-212ENST00000491833 EVCP57679 992 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 EPHA7Q15375 998 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 NPY5RQ15761 445 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 ZNF528Q3MIS6 628 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 NCAPH2Q6IBW4 605 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 GRASPQ7Z6J2 395 aaPredicted RBP16.08■□□□□ 0.16
SSR4-212ENST00000491833 NEK8Q86SG6 692 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
SSR4-212ENST00000491833 BORCS6Q96GS4 357 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 SPATA6Q9NWH7 488 aaPredicted RBP16.08■□□□□ 0.16
SSR4-212ENST00000491833 NCDNQ9UBB6 729 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 FBXO4Q9UKT5 387 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.16
SSR4-212ENST00000491833 CCDC194A0A1B0GVG4 234 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 TBX3O15119 743 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 MARCH6O60337 910 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 HNRNPA1P09651 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
SSR4-212ENST00000491833 ARF4P18085 180 aaPredicted RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 AKAP5P24588 427 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 GPC5P78333 572 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 PRKCQQ04759 706 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 MBTD1Q05BQ5 628 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 SNW1Q13573 536 aaKnown RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms