RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 EFEMP2O95967 443 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 ALDH2P05091 517 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 PRR29P0C7W0 189 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 KLRC2P26717 231 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 CDC42EP1Q00587 391 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 NHLH1Q02575 133 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 RAD51AP2Q09MP3 1159 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 PTPN21Q16825 1174 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 NOTUMQ6P988 496 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-211ENST00000491581 LRRC15Q8TF66 581 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 CCDC43Q96MW1 224 aaKnown RBP9.87□□□□□ -0.83
HDAC3-211ENST00000491581 NAP1L4Q99733 375 aaKnown RBP9.87□□□□□ -0.83
HDAC3-211ENST00000491581 CCDC113Q9H0I3 377 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 BHMT2Q9H2M3 363 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 GOLGA2P5Q9HBQ8 144 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 MAN1C1Q9NR34 630 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
HDAC3-211ENST00000491581 MYH11P35749 1972 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 NPHP3-ACAD11A0A0J9YXS1 232 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 A0A1B0GUA9 196 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 ASAP2O43150 1006 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 NARSO43776 548 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 RECQL4O94761 1208 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 KIF4AO95239 1232 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 SKIP12755 728 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 ANK1P16157 1881 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 CCT6AP40227 531 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 OSTNP61366 133 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 NTHL1P78549 312 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 TCF15Q12870 199 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 PTGDRQ13258 359 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 TFDP1Q14186 410 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 MXD4Q14582 209 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 PDCD11Q14690 1871 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 ZRSR1Q15695 479 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 NAB2Q15742 525 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 SEZ6Q53EL9 994 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 RTP2Q5QGT7 225 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 NT5DC1Q5TFE4 455 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 KIAA0319Q5VV43 1072 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 SLC27A1Q6PCB7 646 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 CABP7Q86V35 215 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 RNF168Q8IYW5 571 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 DAW1Q8N136 415 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 MMTAG2Q9BU76 263 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 HERC2P3Q9BVR0 1158 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 TRIM6Q9C030 488 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 FZD8Q9H461 694 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 TUFT1Q9NNX1 390 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 DBR1Q9UK59 544 aaKnown RBP9.86□□□□□ -0.83
HDAC3-211ENST00000491581 KIAA1024Q9UPX6 916 aa9.86□□□□□ -0.83
HDAC3-211ENST00000491581 ARHGEF35A5YM69 484 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 SPDYE4A6NLX3 237 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 GAS2O43903 313 aaKnown RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 SOD2P04179 222 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 PRKCBP05771 671 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 CYP11B2P19099 503 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 RPA1P27694 616 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 GRIN1Q05586 938 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 GNL2Q13823 731 aaKnown RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 SAFBQ15424 915 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 CDCA2Q69YH5 1023 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 KIAA1841Q6NSI8 718 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 CES5AQ6NT32 575 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 FUT10Q6P4F1 479 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 TAS1R3Q7RTX0 852 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 FAM184AQ8NB25 1140 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 TMEM87AQ8NBN3 555 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 C3orf58Q8NDZ4 430 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 SNX29Q8TEQ0 813 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 RIN2Q8WYP3 895 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 RPS6KC1Q96S38 1066 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 TMEM175Q9BSA9 504 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 POLR3CQ9BUI4 534 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 FOXP1Q9H334 677 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 MRPL17Q9NRX2 175 aaKnown RBP9.85□□□□□ -0.83
HDAC3-211ENST00000491581 LRWD1Q9UFC0 647 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 IRAK3Q9Y616 596 aa9.85□□□□□ -0.83
HDAC3-211ENST00000491581 CNTNAP2Q9UHC6 1331 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 NOTCH4Q99466 2003 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 CCDC195A0A1B0GUA6 201 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 INPPL1O15357 1258 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 PI15O43692 258 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 URODP06132 367 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 SRGAP2BP0DMP2 458 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 HOXB8P17481 243 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 GLUD2P49448 558 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 MRE11P49959 708 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 CDR1P51861 262 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 PEX3P56589 373 aa9.84□□□□□ -0.83
HDAC3-211ENST00000491581 SOX4Q06945 474 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-211ENST00000491581 SIGLEC14Q08ET2 396 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms