RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
HDAC3-210ENST00000490808 DCDC2CA8MYV0 355 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 EIF3CLB5ME19 914 aaKnown RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 H3BRB1 525 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 PMM2O15305 246 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 MAGEB2O15479 319 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 SORBS3O60504 671 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 SERPING1P05155 500 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 MYL3P08590 195 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 TMOD1P28289 359 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 ARL2P36404 184 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 FMO5P49326 533 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 LIG4P49917 911 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 CDK7P50613 346 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 VAMP7P51809 220 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 KCNA1Q09470 495 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 ITGA7Q13683 1181 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 TARBP2Q15633 366 aaKnown RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 PDXDC1Q6P996 788 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 KIAA1328Q86T90 577 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 REXO1L1PQ8IX06 675 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 PSPC1Q8WXF1 523 aaKnown RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 POMGNT1Q8WZA1 660 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 COPS5Q92905 334 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 SLC35C1Q96A29 364 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 EIF3CQ99613 913 aaKnown RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 TUT1Q9H6E5 874 aaKnown RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 NHEJ1Q9H9Q4 299 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-210ENST00000490808 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 HSPBP1Q9NZL4 362 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 TRPC6Q9Y210 931 aa11.15□□□□□ -0.62
HDAC3-210ENST00000490808 COL1A2P08123 1366 aa11.15□□□□□ -0.63
HDAC3-210ENST00000490808 TMEM150BA6NC51 233 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 MYADML2A6NDP7 307 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 HAS3O00219 553 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 HNRNPDLO14979 420 aaKnown RBP11.14□□□□□ -0.63
HDAC3-210ENST00000490808 AKR1B10O60218 316 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 PARNO95453 639 aaKnown RBP11.14□□□□□ -0.63
HDAC3-210ENST00000490808 LGALS2P05162 132 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 ATP4AP20648 1035 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 CASQ1P31415 396 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 GTF2H1P32780 548 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 BMP8BP34820 402 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 CASP4P49662 377 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 POLR2FP61218 127 aaKnown RBP11.14□□□□□ -0.63
HDAC3-210ENST00000490808 CDC42EP1Q00587 391 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 BEX3Q00994 111 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 MYL7Q01449 175 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 ASIC2Q16515 512 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 KLHDC7AQ5VTJ3 777 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 CXCL17Q6UXB2 119 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDAC3-210ENST00000490808 GPD1LQ8N335 351 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 DIS3LQ8TF46 1054 aaKnown RBP11.14□□□□□ -0.63
HDAC3-210ENST00000490808 BORCS6Q96GS4 357 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 GDF15Q99988 308 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 BCAS3Q9H6U6 928 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 MTMR10Q9NXD2 777 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 GCNT4Q9P109 453 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
HDAC3-210ENST00000490808 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 EVPLQ92817 2033 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 LAMA3Q16787 3333 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 RRN3P2A6NIE6 340 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 ZNF233A6NK53 670 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 LRRC53A6NM62 1247 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 CAND2O75155 1236 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 PIGRP01833 764 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 FERP16591 822 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 PON1P27169 355 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 STAT1P42224 750 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC3-210ENST00000490808 PSEN2P49810 448 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 KLK7P49862 253 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 KLHL30Q0D2K2 578 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 KIF5AQ12840 1032 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-210ENST00000490808 RAPGEF1Q13905 1077 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 MFSD10Q14728 455 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 PLCB4Q15147 1175 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 SURF1Q15526 300 aa11.13□□□□□ -0.63
HDAC3-210ENST00000490808 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
HDAC3-210ENST00000490808 TOGARAM2Q6ZUX3 1019 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms