RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SEC24BO95487 1268 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 SPATA31C1P0DKV0 1188 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 RBM25P49756 843 aaKnown RBP21.83■■□□□ 1.09
SREBF1-216ENST00000490796 MRE11P49959 708 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 HMGN5P82970 282 aaKnown RBP21.83■■□□□ 1.09
SREBF1-216ENST00000490796 OTOP3Q7RTS5 596 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 GPR149Q86SP6 731 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 ZDHHC14Q8IZN3 488 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 ASIC4Q96FT7 647 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 PRIMPOLQ96LW4 560 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 ZSCAN31Q96LW9 406 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-216ENST00000490796 POLR3CQ9BUI4 534 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-216ENST00000490796 C2orf40Q9H1Z8 148 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 MARCH5Q9NX47 278 aa21.83■■□□□ 1.09
SREBF1-216ENST00000490796 NOL7Q9UMY1 257 aaKnown RBP21.83■■□□□ 1.09
SREBF1-216ENST00000490796 MYO10Q9HD67 2058 aa21.83■■□□□ 1.08
SREBF1-216ENST00000490796 A0A1B0GUA9 196 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 LILRB3O75022 631 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 MED24O75448 989 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 DSC1Q08554 894 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 ST3GAL1Q11201 340 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 TTC38Q5R3I4 469 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 IER5LQ5T953 404 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 HAUS3Q68CZ6 603 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 MAN1C1Q9NR34 630 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 MIOSQ9NXC5 875 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 KLK14Q9P0G3 267 aa21.82■■□□□ 1.08
SREBF1-216ENST00000490796 GLUD1P00367 558 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 ASGR2P07307 311 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 LIG1P18858 919 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 RPA1P27694 616 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 GRIK3Q13003 919 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 POTEGQ6S5H5 508 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 PADI6Q6TGC4 694 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 TAS1R1Q7RTX1 841 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 ADPGKQ9BRR6 497 aa21.81■■□□□ 1.08
SREBF1-216ENST00000490796 N4BP3O15049 544 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 TEX28O15482 410 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 TADA2AO75478 443 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 BRD1O95696 1058 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 AVPR2P30518 371 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 PRPF4BQ13523 1007 aaKnown RBP21.8■■□□□ 1.08
SREBF1-216ENST00000490796 MAPK6Q16659 721 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 C15orf39Q6ZRI6 1047 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 PRSS33Q8NF86 280 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 DEPTORQ8TB45 409 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 IFT74Q96LB3 600 aa21.8■■□□□ 1.08
SREBF1-216ENST00000490796 SH2B1Q9NRF2 756 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-216ENST00000490796 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.8■■□□□ 1.08
SREBF1-216ENST00000490796 WDFY4Q6ZS81 3184 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 ZMYM2Q9UBW7 1377 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 CYP11B2P19099 503 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 CCT6AP40227 531 aaKnown RBP21.79■■□□□ 1.08
SREBF1-216ENST00000490796 TRAPPC10P48553 1259 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 DSG1Q02413 1049 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 PPP2R5AQ15172 486 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 USP41Q3LFD5 358 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 KIAA0319Q5VV43 1072 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 CDCA2Q69YH5 1023 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-216ENST00000490796 FUT10Q6P4F1 479 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 NOSTRINQ8IVI9 506 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 FBXO18Q8NFZ0 1043 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 IRF2BPLQ9H1B7 796 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 MFSD1Q9H3U5 465 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 RXFP1Q9HBX9 757 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 ADAM28Q9UKQ2 775 aa21.79■■□□□ 1.08
SREBF1-216ENST00000490796 PRKCBP05771 671 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 MYBP10242 640 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 MUTP22033 750 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 VCPP55072 806 aaKnown RBP21.78■■□□□ 1.08
SREBF1-216ENST00000490796 CREMQ03060 361 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 FAM187BQ17R55 369 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 CMASQ8NFW8 434 aaPredicted RBP21.78■■□□□ 1.08
SREBF1-216ENST00000490796 STAMQ92783 540 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 RAB34Q9BZG1 259 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 FZD8Q9H461 694 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 LRWD1Q9UFC0 647 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 STK24Q9Y6E0 443 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 CACNA1HO95180 2353 aa21.78■■□□□ 1.08
SREBF1-216ENST00000490796 TDRD15B5MCY1 1934 aaKnown RBP21.78■■□□□ 1.08
SREBF1-216ENST00000490796 CCDC195A0A1B0GUA6 201 aa21.77■■□□□ 1.08
SREBF1-216ENST00000490796 F8W810 466 aa21.77■■□□□ 1.08
SREBF1-216ENST00000490796 NAMPTP43490 491 aa21.77■■□□□ 1.08
SREBF1-216ENST00000490796 CYP26C1Q6V0L0 522 aa21.77■■□□□ 1.08
SREBF1-216ENST00000490796 PALB2Q86YC2 1186 aa21.77■■□□□ 1.08
SREBF1-216ENST00000490796 RIN2Q8WYP3 895 aaPredicted RBP21.77■■□□□ 1.08
SREBF1-216ENST00000490796 PIDD1Q9HB75 910 aa21.77■■□□□ 1.08
SREBF1-216ENST00000490796 SF3B1O75533 1304 aaKnown RBP eCLIP21.77■■□□□ 1.071e-7■■■■■ 152.8
SREBF1-216ENST00000490796 PDGFBP01127 241 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-216ENST00000490796 GBP2P32456 591 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-216ENST00000490796 TUSC3Q13454 348 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 HSP90AA2PQ14568 343 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-216ENST00000490796 APBB1IPQ7Z5R6 666 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-216ENST00000490796 GLYCTKQ8IVS8 523 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 RNF168Q8IYW5 571 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-216ENST00000490796 GSTCDQ8NEC7 633 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 HDAC7Q8WUI4 952 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 RABGGTAQ92696 567 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 B3GALT6Q96L58 329 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms