RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 SUPT3HO75486 399 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 RFC1P35251 1148 aaPredicted RBP12.26□□□□□ -0.45
PCSK9-202ENST00000490692 POLGP54098 1239 aaPredicted RBP12.26□□□□□ -0.45
PCSK9-202ENST00000490692 PTENP60484 403 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 EVX2Q03828 476 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 PIGBQ92521 554 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 TMEM47Q9BQJ4 181 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 MAF1Q9H063 256 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 GALNT8Q9NY28 637 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 SLC12A4Q9UP95 1085 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 KDM3AQ9Y4C1 1321 aa12.26□□□□□ -0.45
PCSK9-202ENST00000490692 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 O00370 1275 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 PIAS1O75925 651 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 RARGP13631 454 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 PSMC2P35998 433 aaKnown RBP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 GRB10Q13322 594 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 IZUMO3Q5VZ72 239 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 ANO7Q6IWH7 933 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 LCA5Q86VQ0 697 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 RHOT2Q8IXI1 618 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 PAGR1Q9BTK6 254 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 GINM1Q9NU53 330 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 NMRK1Q9NWW6 199 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 ANAPC7Q9UJX3 599 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 C5orf60A6NFR6 353 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 MIF4GDA9UHW6 222 aaKnown RBP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 SGK1O00141 431 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 HNRNPRO43390 633 aaKnown RBP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 TTLL1O95922 423 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 MT-ND3P03897 115 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 LDHCP07864 332 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 YWHAGP61981 247 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 MECOMQ03112 1051 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 MED21Q13503 144 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 HGSNATQ68CP4 663 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 NT5DC3Q86UY8 548 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 ZBED8Q8IZ13 594 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 CENPTQ96BT3 561 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 LRRC4CQ9HCJ2 640 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 ERVK-5Q9HDB9 667 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 COQ9O75208 318 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 ACADSP16219 412 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 AP2B1P63010 937 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 MCL1Q07820 350 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 BNIP1Q12981 228 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 MMEL1Q495T6 779 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 TRMT10CQ7L0Y3 403 aaKnown RBP12.25□□□□□ -0.45
PCSK9-202ENST00000490692 ADGRA1Q86SQ6 560 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 RBM15Q96T37 977 aaKnown RBP eCLIP12.25□□□□□ -0.452e-8■■■■■ 29.5
PCSK9-202ENST00000490692 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 NUP85Q9BW27 656 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 IFT122Q9HBG6 1241 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 KLHL11Q9NVR0 708 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 CLIC5Q9NZA1 410 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
PCSK9-202ENST00000490692 GSTA2P09210 222 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 CASP4P49662 377 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 GPC5P78333 572 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 IRGCQ6NXR0 463 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 LRRC74BQ6ZQY2 392 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 CCDC89Q8N998 374 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 SLC30A5Q8TAD4 765 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 KRT35Q92764 455 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 OLFM3Q96PB7 478 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 FNBP1Q96RU3 617 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 PDP2Q9P2J9 529 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 TACC3Q9Y6A5 838 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 RBM47A0AV96 593 aaKnown RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 ZWINTO95229 277 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 STAMBPO95630 424 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 SOX5P35711 763 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 ATXN3P54252 364 aaPredicted RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 SH3BGRP55822 239 aaPredicted RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 ZNF564Q8TBZ8 553 aaPredicted RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 SNF8Q96H20 258 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 LZTS2Q9BRK4 669 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 ARMCX1Q9P291 453 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 MARF1Q9Y4F3 1742 aaKnown RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 COILP38432 576 aaPredicted RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 GCLMP48507 274 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 MARCKSL1P49006 195 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 KNOP1Q1ED39 458 aaKnown RBP12.24□□□□□ -0.45
PCSK9-202ENST00000490692 TSHZ1Q6ZSZ6 1077 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 ECHDC2Q86YB7 292 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 GALNT15Q8N3T1 639 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 MPP4Q96JB8 637 aa12.24□□□□□ -0.45
PCSK9-202ENST00000490692 PPP1R1BQ9UD71 204 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms