RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ENTPD3O75355 529 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 EIF3JO75822 258 aaKnown RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 FGBP02675 491 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 ZSCAN20P17040 1043 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 AMPD1P23109 780 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SHMT1P34896 483 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CRKP46108 304 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 ERVK-24P63145 666 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 FAAP100Q0VG06 881 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 STK4Q13043 487 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 GRB10Q13322 594 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 PICALMQ13492 652 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 LRRC41Q15345 812 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CCL14Q16627 93 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CCDC96Q2M329 555 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MAP9Q49MG5 647 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CERKLQ49MI3 558 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CCDC122Q5T0U0 273 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 PAPD7Q5XG87 772 aaKnown RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 HAUS3Q68CZ6 603 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SLFN13Q68D06 897 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CDC42EP5Q6NZY7 148 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 TMEM179Q6ZVK1 233 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MIGA2Q7L4E1 593 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 HDXQ7Z353 690 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 KIAA1328Q86T90 577 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MYOCDQ8IZQ8 938 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SLC35F6Q8N357 371 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 RNF10Q8N5U6 811 aaKnown RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MSANTD4Q8NCY6 345 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 GMCL1P1Q8NEA9 526 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 NEK11Q8NG66 645 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 NEK9Q8TD19 979 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SNX29Q8TEQ0 813 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 RUBCNQ92622 972 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CNOT6LQ96LI5 555 aaKnown RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 FAM20AQ96MK3 541 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MBOAT7Q96N66 472 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 DESI2Q9BSY9 194 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MMTAG2Q9BU76 263 aaKnown RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 AMNQ9BXJ7 453 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 PARD6BQ9BYG5 372 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 NDST4Q9H3R1 872 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 EHMT1Q9H9B1 1298 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 BLOC1S4Q9NUP1 217 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 RNF14Q9UBS8 474 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.55□□□□□ -1.521e-8■■■□□ 16
PTPRK-213ENST00000490332 TBX21Q9UL17 535 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 RAB21Q9UL25 225 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 PLAGL2Q9UPG8 496 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 MAPK8IP1Q9UQF2 711 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SAR1BQ9Y6B6 198 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 SLC4A7Q9Y6M7 1214 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 CDK5RAP2Q96SN8 1893 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 HELZ2Q9BYK8 2649 aaKnown RBP5.55□□□□□ -1.52
PTPRK-213ENST00000490332 LOC285556D6RIA3 1793 aa5.55□□□□□ -1.52
PTPRK-213ENST00000490332 OTOGLQ3ZCN5 2332 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 FRMPD2Q68DX3 1309 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 COL4A4P53420 1690 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 FOCADQ5VW36 1801 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 SSU72P8A0A1W2PR75 194 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 TARSL2A2RTX5 802 aaKnown RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 TRIM49BA6NDI0 452 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 MYMKA6NI61 221 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 PP2D1A8MPX8 630 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 B4DLN1 442 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 ADAMTS3O15072 1205 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 CETN3O15182 167 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 SEPT4O43236 478 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 TACC1O75410 805 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 LCA5LO95447 670 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 CA3P07451 260 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 PNMA6AP0CW24 399 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 EPXP11678 715 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 IDEP14735 1019 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 CSF2RAP15509 400 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 PTPRAP18433 802 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 MUTP22033 750 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 RPL13P26373 211 aaKnown RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 ANXA13P27216 316 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 ARHGAP25P42331 645 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 SLC1A4P43007 532 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 VAV2P52735 878 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 RABGGTBP53611 331 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 VCPP55072 806 aaKnown RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 ATP2B2Q01814 1243 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 ITIH3Q06033 890 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 SIGLEC14Q08ET2 396 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 CLN3Q13286 438 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 MCM6Q14566 821 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 MTF1Q14872 753 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 TERF2Q15554 542 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 EDRF1Q3B7T1 1238 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 Q4G0T1 1027 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 C10orf76Q5T2E6 689 aa5.54□□□□□ -1.52
PTPRK-213ENST00000490332 APOBEC3HQ6NTF7 200 aaKnown RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 CC2D1AQ6P1N0 951 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-213ENST00000490332 TATDN1Q6P1N9 297 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 341.3 ms