RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 NCLNQ969V3 563 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 AP1M1Q9BXS5 423 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 PUS3Q9BZE2 481 aaKnown RBP9.36□□□□□ -0.91
LSAMP-205ENST00000490035 PKD2L2Q9NZM6 624 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 VEPH1Q14D04 833 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 C16orf89Q6UX73 402 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 RASGRP4Q8TDF6 673 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 CREB3O43889 395 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 SASH1O94885 1247 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 CD58P19256 250 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 LTKP29376 864 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 CDK17Q00537 523 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 FLOT2Q14254 428 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 CAPRIN1Q14444 709 aaKnown RBP9.36□□□□□ -0.91
LSAMP-205ENST00000490035 EPHA7Q15375 998 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 TADA1Q96BN2 335 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 C7orf25Q9BPX7 421 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 LRRC7Q96NW7 1537 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 FAM95CA0A1B0GW59 222 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 MAGEB2O15479 319 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 ESRRBO95718 433 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 TMEM270Q6UE05 265 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 ANKS3Q6ZW76 656 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 GAS2L3Q86XJ1 694 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 SP110Q9HB58 689 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 MAGOHP61326 146 aaKnown RBP9.36□□□□□ -0.91
LSAMP-205ENST00000490035 GPS1Q13098 491 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 COG4Q9H9E3 785 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 A0A0G2JND7 137 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 LRRC53A6NM62 1247 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 BRAFP15056 766 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 CRKP46108 304 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 HSPA13P48723 471 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SLC7A5Q01650 507 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 HIC1Q14526 733 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SLC18A3Q16572 532 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 BEND6Q5SZJ8 279 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 AGGF1Q8N302 714 aaeCLIP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RDM1Q8NG50 284 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PITPNM2Q9BZ72 1349 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 HOXC6P09630 235 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 MAP3K7CLP57077 242 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 TRIM60Q495X7 471 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 C2orf69Q8N8R5 385 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PPHLN1Q8NEY8 458 aaKnown RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SLC38A7Q9NVC3 462 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 TLR7Q9NYK1 1049 aaKnown RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 CD4P01730 458 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PSMC1P62191 440 aaKnown RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 TOB2Q14106 344 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 DAB2IPQ5VWQ8 1189 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 TMEM47Q9BQJ4 181 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 VPS33BQ9H267 617 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PSD3Q9NYI0 1048 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RASSF10A6NK89 507 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 KRT27Q7Z3Y8 459 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 ZBTB33Q86T24 672 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 MKNK1Q9BUB5 465 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PCDHA10Q9Y5I2 948 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RASGRP2Q7LDG7 609 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 QTRT2Q9H974 415 aaKnown RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RNF103-CHMP3A0A140T963 221 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 MAP3K13O43283 966 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 FTLP02792 175 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RXRBP28702 533 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 KRT72Q14CN4 511 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 TERB1Q8NA31 727 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 CEP95Q96GE4 821 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 KRT87PA6NCN2 255 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 DGAT1O75907 488 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 FCER1AP12319 257 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SLCO1A2P46721 670 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SLC26A7Q8TE54 656 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 EPN3Q9H201 632 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 IRAK4Q9NWZ3 460 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 GTSE1Q9NYZ3 720 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 CPDO75976 1380 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 COL15A1P39059 1388 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PCYT1AP49585 367 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 RAP1GDS1P52306 607 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 SNX17Q15036 470 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 LIMA1Q9UHB6 759 aaKnown RBP9.35□□□□□ -0.91
LSAMP-205ENST00000490035 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
LSAMP-205ENST00000490035 CFLARO15519 480 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 SUPT3HO75486 399 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 KRT14P02533 472 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 GGCXP38435 758 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 RRM2BQ7LG56 351 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 HPS3Q969F9 1004 aa9.34□□□□□ -0.91
LSAMP-205ENST00000490035 ARHGEF26Q96DR7 871 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms