RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 NCOR2Q9Y618 2525 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 MYH15Q9Y2K3 1946 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 POTEMA6NI47 508 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 ASAP2O43150 1006 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 TSPAN1O60635 241 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 LRRN2O75325 713 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 CDC45O75419 566 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 C1RP00736 705 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 GLULP15104 373 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 RPL17P18621 184 aaKnown RBP15.57■□□□□ 0.08
VARS-227ENST00000489979 SSRP1Q08945 709 aaKnown RBP15.57■□□□□ 0.08
VARS-227ENST00000489979 EMC2Q15006 297 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 NPY5RQ15761 445 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 INF2Q27J81 1249 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 FUT10Q6P4F1 479 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 NOTUMQ6P988 496 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 LILRA6Q6PI73 481 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 PJA1Q8NG27 643 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 CCDC51Q96ER9 411 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 RPP25Q9BUL9 199 aaKnown RBP15.57■□□□□ 0.08
VARS-227ENST00000489979 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.57■□□□□ 0.08
VARS-227ENST00000489979 FNIP2Q9P278 1114 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 ARID2Q68CP9 1835 aa15.57■□□□□ 0.08
VARS-227ENST00000489979 GPR179Q6PRD1 2367 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 FSHRP23945 695 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 AXLP30530 894 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 YWHABP31946 246 aaKnown RBP15.56■□□□□ 0.08
VARS-227ENST00000489979 HSPA4P34932 840 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 PTENP60484 403 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 USP41Q3LFD5 358 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 C4orf19Q8IY42 314 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 DAGLBQ8NCG7 672 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 FAM20AQ96MK3 541 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 LXNQ9BS40 222 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 CSRNP2Q9H175 543 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 KCNMB3Q9NPA1 279 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 GIT1Q9Y2X7 761 aa15.56■□□□□ 0.08
VARS-227ENST00000489979 ZBTB39O15060 712 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 ZMYND10O75800 440 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 DEXIO95424 95 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 EVCP57679 992 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 STARD6P59095 220 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 GPC5P78333 572 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 NCBP1Q09161 790 aaKnown RBP15.55■□□□□ 0.08
VARS-227ENST00000489979 PCBP1Q15365 356 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■□□□□ 8.6
VARS-227ENST00000489979 EPHA7Q15375 998 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 XKR9Q5GH70 373 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 PARM1Q6UWI2 310 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 OTUD6AQ7L8S5 288 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 GPR65Q8IYL9 337 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 MAML2Q8IZL2 1156 aaPredicted RBP15.55■□□□□ 0.08
VARS-227ENST00000489979 SUMF1Q8NBK3 374 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 GSTCDQ8NEC7 633 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 RABGGTAQ92696 567 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 FGF14Q92915 247 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 SHDQ96IW2 340 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 AIFM3Q96NN9 605 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 MTRQ99707 1265 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 TRIM6Q9C030 488 aaPredicted RBP15.55■□□□□ 0.08
VARS-227ENST00000489979 NXF3Q9H4D5 531 aaKnown RBP15.55■□□□□ 0.08
VARS-227ENST00000489979 DLL3Q9NYJ7 618 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 RGL1Q9NZL6 768 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 ADAM28Q9UKQ2 775 aa15.55■□□□□ 0.08
VARS-227ENST00000489979 COL4A3Q01955 1670 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 CACNA1BQ00975 2339 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 INO80B-WBP1J3KQ70 363 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 KINO60870 393 aaKnown RBP15.54■□□□□ 0.08
VARS-227ENST00000489979 AKAP5P24588 427 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 SNW1Q13573 536 aaKnown RBP15.54■□□□□ 0.08
VARS-227ENST00000489979 GALNT17Q6IS24 598 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 PRSS55Q6UWB4 352 aaPredicted RBP15.54■□□□□ 0.08
VARS-227ENST00000489979 KRT25Q7Z3Z0 450 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 GRASPQ7Z6J2 395 aaPredicted RBP15.54■□□□□ 0.08
VARS-227ENST00000489979 HACE1Q8IYU2 909 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 DYDC2Q96IM9 177 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 XPNPEP1Q9NQW7 623 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 CACNG4Q9UBN1 327 aa15.54■□□□□ 0.08
VARS-227ENST00000489979 ZFP37Q9Y6Q3 630 aaPredicted RBP15.54■□□□□ 0.08
VARS-227ENST00000489979 KANSL1LA0AUZ9 987 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 TADA2AO75478 443 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 ARF4P18085 180 aaPredicted RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 PSMA5P28066 241 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 NTHL1P78549 312 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 CYP4A11Q02928 519 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 CREMQ03060 361 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 MBTD1Q05BQ5 628 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 CTTNQ14247 550 aaKnown RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 MXD4Q14582 209 aaPredicted RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 AMHR2Q16671 573 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 RSPO4Q2I0M5 234 aaPredicted RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 RTP2Q5QGT7 225 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 NCAPH2Q6IBW4 605 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 ASAP3Q8TDY4 903 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 HAS1Q92839 578 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 ZSWIM4Q9H7M6 989 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 SPATA6Q9NWH7 488 aaPredicted RBP15.53■□□□□ 0.08
VARS-227ENST00000489979 KLK14Q9P0G3 267 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms