RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 A0A1W2PRX2 142 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 PMS2P1A4D2B8 440 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 CAPN14A8MX76 684 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 CBX4O00257 560 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 APAF1O14727 1248 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 TBX3O15119 743 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ABLIM3O94929 683 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 CYP17A1P05093 508 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 BPIFB4P59827 614 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 HHEXQ03014 270 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 FSTL1Q12841 308 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 MAPK7Q13164 816 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 MYBPC3Q14896 1274 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 DGKDQ16760 1214 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 TMEM95Q3KNT9 176 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 GRAMD1BQ3KR37 738 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 CFAP100Q494V2 611 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 CREB3L3Q68CJ9 461 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 NXNQ6DKJ4 435 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 FAM43BQ6ZT52 329 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 UBE2R2Q712K3 238 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ADGRE4PQ86SQ3 457 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 DGKHQ86XP1 1220 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 AMOTL1Q8IY63 956 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 VPS37AQ8NEZ2 397 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 JPH3Q8WXH2 748 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 GCDHQ92947 438 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 NKD2Q969F2 451 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 GPHA2Q96T91 129 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ELF4Q99607 663 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ZNF700Q9H0M5 742 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 SLC6A15Q9H2J7 730 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 AURKAIP1Q9NWT8 199 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 OBP2AQ9NY56 170 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 SLC5A4Q9NY91 659 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 H2AFY2Q9P0M6 372 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ZNF180Q9UJW8 692 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 CCER2I3L3R5 266 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 GPR39O43194 453 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ZNF37AP17032 561 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ZSCAN20P17040 1043 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 FLT3P36888 993 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 SESN2P58004 480 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ADAM8P78325 824 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 STAT4Q14765 748 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 WDR78Q5VTH9 848 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ESRP1Q6NXG1 681 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 MYRIPQ8NFW9 859 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 WDR66Q8TBY9 1149 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 LPPQ93052 612 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 GFM2Q969S9 779 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 SLC7A6OSQ96CW6 309 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 MTFR1LQ9H019 292 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 KCMF1Q9P0J7 381 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 ZNHIT2Q9UHR6 403 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 DNAI1Q9UI46 699 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 MAPRE3Q9UPY8 281 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 LZTS1Q9Y250 596 aa3.99□□□□□ -1.77
DEPDC1-204ENST00000489862 MROH2BQ7Z745 1585 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 KAT6BQ8WYB5 2073 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 GOLGA8BA8MQT2 603 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 ZNF500O60304 480 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 RFPL3O75679 317 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 APOL3O95236 402 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 HNRNPLP14866 589 aaKnown RBP eCLIP3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 HOXB6P17509 224 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 KRT4P19013 534 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 RAPGEF1Q13905 1077 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 EPHA7Q15375 998 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 UNQ6494/PRO21346Q6UXR6 183 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 GAREM2Q75VX8 874 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 NXPE1Q8N323 547 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 CNTD1Q8N815 330 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 RTF1Q92541 710 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 DYDC2Q96IM9 177 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 NEUROD6Q96NK8 337 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 SLC12A5Q9H2X9 1139 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 AS3MTQ9HBK9 375 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 ANLNQ9NQW6 1124 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 TOMM22Q9NS69 142 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 OXSMQ9NWU1 459 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 LUZP4Q9P127 313 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 IP6K2Q9UHH9 426 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 DDX20Q9UHI6 824 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 ZBTB21Q9ULJ3 1066 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 GIT1Q9Y2X7 761 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 SPO11Q9Y5K1 396 aa3.98□□□□□ -1.77
DEPDC1-204ENST00000489862 UBE2QL1A1L167 161 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 NEMP1O14524 444 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 KPNA6O60684 536 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 LMNAP02545 664 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 ATP2A2P16615 1042 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 POU5F1BQ06416 359 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 RRP1BQ14684 758 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 ABCB5Q2M3G0 1257 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 MORC1Q86VD1 984 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 NME9Q86XW9 330 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 THEMISQ8N1K5 641 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 CBARPQ8N350 705 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 PLA2G15Q8NCC3 412 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms