RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 TRIM49BA6NDI0 452 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 BECN2A8MW95 431 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 ABLIM1O14639 778 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 OGTO15294 1046 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 NR2F2P24468 414 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 ADSSP30520 456 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 PMS1P54277 932 aaKnown RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 POU5F1Q01860 360 aaKnown RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 ADAM9Q13443 819 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 DSC3Q14574 896 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 EEF1DP3Q658K8 133 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 CNKSR3Q6P9H4 555 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 XXYLT1Q8NBI6 393 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 DUSP9Q99956 384 aaKnown RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 CBWD1Q9BRT8 395 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 OSBPL7Q9BZF2 842 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 TRIM6Q9C030 488 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 CDT1Q9H211 546 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 C1orf112Q9NSG2 853 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 HSPBP1Q9NZL4 362 aa15.16■□□□□ 0.02
C9orf3-221ENST00000489562 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
C9orf3-221ENST00000489562 TISP43B9A030 160 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 CLIC2O15247 247 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 MAPK13O15264 365 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 EXOC3O60645 756 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 EFCAB14O75071 495 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 GNA14O95837 355 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 ITGB8P26012 769 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 CYP2J2P51589 502 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 DEFB128Q7Z7B8 93 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 FAM114A1Q8IWE2 563 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 ZBTB45Q96K62 511 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-221ENST00000489562 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 ADAM2Q99965 735 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-221ENST00000489562 IKZF4Q9H2S9 585 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 THAP9Q9H5L6 903 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 NFE2L3Q9Y4A8 694 aa15.15■□□□□ 0.02
C9orf3-221ENST00000489562 SLC16A3O15427 465 aaKnown RBP15.14■□□□□ 0.01
C9orf3-221ENST00000489562 EXTL3O43909 919 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 ZNF623O75123 536 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 NPTXRO95502 500 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 EPB41P11171 864 aaKnown RBP15.14■□□□□ 0.01
C9orf3-221ENST00000489562 ACTN1P12814 892 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 CSF2RAP15509 400 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 GRM5P41594 1212 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 TPM4P67936 248 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 FPGSQ05932 587 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 IKBKEQ14164 716 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 IQCB1Q15051 598 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 UBXN11Q5T124 520 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 LRRC55Q6ZSA7 311 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 FILIP1Q7Z7B0 1213 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 AOPEPQ8N6M6 819 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 MED15Q96RN5 788 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 LBHD1Q9BQE6 289 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-221ENST00000489562 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-221ENST00000489562 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
C9orf3-221ENST00000489562 PCIF1Q9H4Z3 704 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 CBX8Q9HC52 389 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 RGS18Q9NS28 235 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 FAM105AQ9NUU6 356 aa15.14■□□□□ 0.01
C9orf3-221ENST00000489562 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 ABHD14A-ACY1A0A1B0GW23 586 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 GOLGA6L19H0YKK7 550 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 MGEA5O60502 916 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 BAIAP3O94812 1187 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 CLTAP09496 248 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 PSMC2P35998 433 aaKnown RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 CEP135Q66GS9 1140 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 SLC24A5Q71RS6 500 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 USP37Q86T82 979 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 DHX40Q8IX18 779 aaKnown RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 BADQ92934 168 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 EIF2AQ9BY44 585 aaKnown RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 HAPLN2Q9GZV7 340 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 METTL14Q9HCE5 456 aaKnown RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
C9orf3-221ENST00000489562 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
C9orf3-221ENST00000489562 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 C9IYK1 514 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 FAM189A1O60320 539 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 EOMESO95936 686 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 ENPEPQ07075 957 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 SPAG1Q07617 926 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 NCAPHQ15003 741 aa15.12■□□□□ 0.01
C9orf3-221ENST00000489562 SNRNP35Q16560 246 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms