RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 PIGRP01833 764 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 MCF2P10911 925 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 LIG4P49917 911 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 RABGGTBP53611 331 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 SNRPFP62306 86 aaKnown RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 FAM26FQ5R3K3 315 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 MAP4K3Q8IVH8 894 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 GSDMAQ96QA5 445 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 TARS2Q9BW92 718 aaKnown RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 MRPL9Q9BYD2 267 aaKnown RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 PDZD7Q9H5P4 517 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 PTPRHQ9HD43 1115 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 EXOC1Q9NV70 894 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 YBX2Q9Y2T7 364 aaKnown RBP13.63□□□□□ -0.23
COL4A5-206ENST00000489230 IPPQ9Y573 584 aa13.63□□□□□ -0.23
COL4A5-206ENST00000489230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 HNRNPDLO14979 420 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 NR1I2O75469 434 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 NPTXRO95502 500 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 RPN1P04843 607 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 IBSPP21815 317 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 PLA2G5P39877 138 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 MATR3P43243 847 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 YARSP54577 528 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 DPYDQ12882 1025 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 KCNB1Q14721 858 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 SKIV2LQ15477 1246 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 AAK1Q2M2I8 961 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 ZC2HC1CQ53FD0 456 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 MPZL3Q6UWV2 235 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 TOPORSQ9NS56 1045 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 TBC1D7Q9P0N9 293 aa13.62□□□□□ -0.23
COL4A5-206ENST00000489230 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
COL4A5-206ENST00000489230 TTC3P53804 2025 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 KIAA0391O15091 583 aaKnown RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 OFD1O75665 1012 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 PPP1R37O75864 691 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 RB1P06400 928 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 CA3P07451 260 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 PROZP22891 400 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 POU5F1Q01860 360 aaKnown RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 MCL1Q07820 350 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 EHHADHQ08426 723 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 KMT5BQ4FZB7 885 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 TMCO2Q7Z6W1 182 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 TSPAN18Q96SJ8 248 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 C1QTNF1Q9BXJ1 281 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 RSAD1Q9HA92 442 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 PARP2Q9UGN5 583 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-206ENST00000489230 UBE4BO95155 1302 aa13.61□□□□□ -0.23
COL4A5-206ENST00000489230 SIP14410 1827 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 KLRC4O43908 158 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 RHOBTB3O94955 611 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
COL4A5-206ENST00000489230 GRM5P41594 1212 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 ZNF568Q3ZCX4 644 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 GOLGA5Q8TBA6 731 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
COL4A5-206ENST00000489230 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 ACAP3Q96P50 834 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 CASD1Q96PB1 797 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 FAM193BQ96PV7 902 aaPredicted RBP13.6□□□□□ -0.23
COL4A5-206ENST00000489230 PLVAPQ9BX97 442 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 PCDHB12Q9Y5F1 795 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
COL4A5-206ENST00000489230 GBF1Q92538 1859 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 A0A0B4J269 797 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 LINC01553A4QN01 128 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 INPPL1O15357 1258 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 CLTAP09496 248 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 MYBP10242 640 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 FGFR1P11362 822 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 MYOGP15173 224 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 GARTP22102 1010 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 CASP1P29466 404 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 BMPR1AP36894 532 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms