RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TMEM132AQ24JP5 1023 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 CABP7Q86V35 215 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 AK8Q96MA6 479 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 MARCH5Q9NX47 278 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 PRKAG3Q9UGI9 489 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 PRG3Q9Y2Y8 225 aaPredicted RBP27.55■■■□□ 2
HMGN1-217ENST00000489072 CLASP2O75122 1294 aaKnown RBP27.54■■■□□ 2
HMGN1-217ENST00000489072 SSBP05455 408 aaKnown RBP eCLIP27.54■■■□□ 2
HMGN1-217ENST00000489072 GUCY2CP25092 1073 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 CA8P35219 290 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 SLC12A3P55017 1021 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 ADHFE1Q8IWW8 467 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 KCTD17Q8N5Z5 321 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 SYT2Q8N9I0 419 aaPredicted RBP27.54■■■□□ 2
HMGN1-217ENST00000489072 LRRC15Q8TF66 581 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 CDK5RAP3Q96JB5 506 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 DRC1Q96MC2 740 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 ZMYM2Q9UBW7 1377 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 IRAK3Q9Y616 596 aa27.54■■■□□ 2
HMGN1-217ENST00000489072 TRIP11Q15643 1979 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.53■■■□□ 2
HMGN1-217ENST00000489072 CCDC169A6NNP5 214 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 F8W810 466 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 PLA2G4BP0C869 781 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 SSTR3P32745 418 aaPredicted RBP27.53■■■□□ 2
HMGN1-217ENST00000489072 OR1G1P47890 313 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 RAD51AP2Q09MP3 1159 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 FAM173BQ6P4H8 233 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 TAS1R3Q7RTX0 852 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 SNTG2Q9NY99 539 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 ARHGAP28Q9P2N2 729 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 USP15Q9Y4E8 981 aaPredicted RBP27.53■■■□□ 2
HMGN1-217ENST00000489072 CLIC4Q9Y696 253 aa27.53■■■□□ 2
HMGN1-217ENST00000489072 C19orf67A6NJJ6 358 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 SFI1A8K8P3 1242 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 K7ERI5 159 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 DMP1Q13316 513 aaPredicted RBP27.52■■■□□ 2
HMGN1-217ENST00000489072 BMS1Q14692 1282 aaKnown RBP27.52■■■□□ 2
HMGN1-217ENST00000489072 ANKRD54Q6NXT1 300 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 ADPGKQ9BRR6 497 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 TIPINQ9BVW5 301 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 CXCL16Q9H2A7 254 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 EPHX3Q9H6B9 360 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 MTMR6Q9Y217 621 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 HCFC2Q9Y5Z7 792 aa27.52■■■□□ 2
HMGN1-217ENST00000489072 PHLPP2Q6ZVD8 1323 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 SLC26A4O43511 780 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 LONP1P36776 959 aaKnown RBP27.51■■□□□ 1.99
HMGN1-217ENST00000489072 GRIK3Q13003 919 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 PTPAQ15257 358 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 PTPN14Q15678 1187 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 ATF7IP2Q5U623 682 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 SYCE2Q6PIF2 218 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 S1PR5Q9H228 398 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 KMT5AQ9NQR1 393 aa27.51■■□□□ 1.99
HMGN1-217ENST00000489072 NPHP3-ACAD11A0A0J9YXS1 232 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 RECQL4O94761 1208 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 EFEMP2O95967 443 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 SRGAP2BP0DMP2 458 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 UBA7P41226 1012 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 ARSHQ5FYA8 562 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 TAS1R1Q7RTX1 841 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 SNX21Q969T3 373 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 RPS6KC1Q96S38 1066 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 TMEM134Q9H6X4 195 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 C17orf75Q9HAS0 396 aa27.5■■□□□ 1.99
HMGN1-217ENST00000489072 PTGESO14684 152 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 SLC16A4O15374 487 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 GIT2Q14161 759 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 DCAF4L1Q3SXM0 396 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 RNF168Q8IYW5 571 aaPredicted RBP27.49■■□□□ 1.99
HMGN1-217ENST00000489072 SUSD6Q92537 303 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 CASP10Q92851 521 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 CALML4Q96GE6 196 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 ACO2Q99798 780 aaKnown RBP27.49■■□□□ 1.99
HMGN1-217ENST00000489072 APOL5Q9BWW9 433 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 BLOC1S4Q9NUP1 217 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 CACNG4Q9UBN1 327 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 STK39Q9UEW8 545 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 TNFSF13BQ9Y275 285 aa27.49■■□□□ 1.99
HMGN1-217ENST00000489072 LILRB3O75022 631 aa27.48■■□□□ 1.99
HMGN1-217ENST00000489072 SOD2P04179 222 aa27.48■■□□□ 1.99
HMGN1-217ENST00000489072 CACNB1Q02641 598 aaPredicted RBP27.48■■□□□ 1.99
HMGN1-217ENST00000489072 KARSQ15046 597 aaKnown RBP27.48■■□□□ 1.99
HMGN1-217ENST00000489072 RABGGTAQ92696 567 aa27.48■■□□□ 1.99
HMGN1-217ENST00000489072 NTPCRQ9BSD7 190 aaKnown RBP27.48■■□□□ 1.99
HMGN1-217ENST00000489072 HERC2P3Q9BVR0 1158 aa27.48■■□□□ 1.99
HMGN1-217ENST00000489072 KCND2Q9NZV8 630 aa27.48■■□□□ 1.99
HMGN1-217ENST00000489072 GDAQ9Y2T3 454 aa27.48■■□□□ 1.99
HMGN1-217ENST00000489072 RBM19Q9Y4C8 960 aaKnown RBP27.48■■□□□ 1.99
HMGN1-217ENST00000489072 TRIOO75962 3097 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 PLS3P13797 630 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 PLCG1P19174 1290 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 MARCKSP29966 332 aaPredicted RBP27.47■■□□□ 1.99
HMGN1-217ENST00000489072 SLC22A17Q8WUG5 538 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 SPIRE2Q8WWL2 714 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 PAAF1Q9BRP4 392 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 TARS2Q9BW92 718 aaKnown RBP27.47■■□□□ 1.99
HMGN1-217ENST00000489072 PTPRHQ9HD43 1115 aa27.47■■□□□ 1.99
HMGN1-217ENST00000489072 MYH15Q9Y2K3 1946 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms