RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TCHPQ9BT92 498 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 TLE6Q9H808 572 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 CLDND1Q9NY35 253 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 ARHGAP28Q9P2N2 729 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 TNFSF13BQ9Y275 285 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 ZMYM2Q9UBW7 1377 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 CITO14578 2027 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-218ENST00000489037 DLL1O00548 723 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 KCNA5P22460 613 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 ABCD1P33897 745 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 IRS1P35568 1242 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 STAT6P42226 847 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 ERVFC1P60507 584 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-218ENST00000489037 TFF2Q03403 129 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 NT5DC1Q5TFE4 455 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 PLPP4Q5VZY2 271 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 USP49Q70CQ1 688 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 KCNG4Q8TDN1 519 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 IGSF21Q96ID5 467 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 REEP2Q9BRK0 252 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 SNTG2Q9NY99 539 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 KLK14Q9P0G3 267 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
BRCA1-218ENST00000489037 PRUNE2Q8WUY3 3088 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 TTLL13PA6NNM8 815 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 INPPL1O15357 1258 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 CUTAO60888 179 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 DDHD2O94830 711 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 SRGAP2BP0DMP2 458 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 OR1G1P47890 313 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 NRIP1P48552 1158 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 SLC11A1P49279 550 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 SCNN1GP51170 649 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 HYAL1Q12794 435 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 GRIK3Q13003 919 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 SMC1AQ14683 1233 aaKnown RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 PUS10Q3MIT2 529 aaKnown RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 EEF1DP3Q658K8 133 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 DDX53Q86TM3 631 aaKnown RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 RBM23Q86U06 439 aaKnown RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 BICD1Q96G01 975 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 ZFP42Q96MM3 310 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 CDCA3Q99618 268 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 ACO2Q99798 780 aaKnown RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 CCDC94Q9BW85 323 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-218ENST00000489037 COLEC11Q9BWP8 271 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 DNAJB4Q9UDY4 337 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 FAM50BQ9Y247 325 aa15.68■□□□□ 0.1
BRCA1-218ENST00000489037 NRP1O14786 923 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 FSCN2O14926 492 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
BRCA1-218ENST00000489037 NDUFV1P49821 464 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 AFF1P51825 1210 aaKnown RBP15.67■□□□□ 0.1
BRCA1-218ENST00000489037 YARSP54577 528 aaKnown RBP15.67■□□□□ 0.1
BRCA1-218ENST00000489037 GIT2Q14161 759 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 LEXMQ3ZCV2 418 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 VPS52Q8N1B4 723 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 TMEM161BQ8NDZ6 487 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 TARS2Q9BW92 718 aaKnown RBP15.67■□□□□ 0.1
BRCA1-218ENST00000489037 PANK2Q9BZ23 570 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 GDAQ9Y2T3 454 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 EYSQ5T1H1 3165 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 NCOR1O75376 2440 aa15.67■□□□□ 0.1
BRCA1-218ENST00000489037 TCHHQ07283 1943 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 K7ENM7 598 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 TRAK2O60296 914 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 RECQL4O94761 1208 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 CXCL14O95715 111 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 EDN1P05305 212 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 THP07101 528 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 MAPTP10636 758 aaKnown RBP15.66■□□□□ 0.1
BRCA1-218ENST00000489037 MCF2P10911 925 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 ME1P48163 572 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 NCKAP1LP55160 1127 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 ADAM15Q13444 863 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 MPZL3Q6UWV2 235 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 ZPBP2Q6X784 338 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 DYMQ7RTS9 669 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 HAUS6Q7Z4H7 955 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 ADGRD2Q7Z7M1 963 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 ZBTB33Q86T24 672 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 FAM178BQ8IXR5 827 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 COLGALT2Q8IYK4 626 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 EFHBQ8N7U6 833 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 PDILTQ8N807 584 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 TOPORSQ9NS56 1045 aaPredicted RBP15.66■□□□□ 0.1
BRCA1-218ENST00000489037 MIOSQ9NXC5 875 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
BRCA1-218ENST00000489037 PRG3Q9Y2Y8 225 aaPredicted RBP15.66■□□□□ 0.1
BRCA1-218ENST00000489037 PER2O15055 1255 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms