RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 FAM43BQ6ZT52 329 aaPredicted RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 TRIM59Q8IWR1 403 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 GPD1LQ8N335 351 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 NOC4LQ9BVI4 516 aaKnown RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 CDT1Q9H211 546 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 ERVK-5Q9HDB9 667 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 MAGEC2Q9UBF1 373 aaPredicted RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
CLDN11-208ENST00000488989 TBX21Q9UL17 535 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 FRMD4BQ9Y2L6 1034 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 SCN5AQ14524 2016 aa17.48■□□□□ 0.39
CLDN11-208ENST00000488989 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 GPR182O15218 404 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 OGTO15294 1046 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 POU5F1Q01860 360 aaKnown RBP17.47■□□□□ 0.39
CLDN11-208ENST00000488989 LPIN1Q14693 890 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 KRT31Q15323 416 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 ZNF568Q3ZCX4 644 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 CRELD2Q6UXH1 353 aaPredicted RBP17.47■□□□□ 0.39
CLDN11-208ENST00000488989 LRRC8DQ7L1W4 858 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 FAM186BQ8IYM0 893 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 ZSWIM2Q8NEG5 633 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 ANKRD20A12PQ8NF67 263 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 CPB2Q96IY4 423 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
CLDN11-208ENST00000488989 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 ANKFY1Q9P2R3 1169 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 ST3GAL5Q9UNP4 418 aa17.47■□□□□ 0.39
CLDN11-208ENST00000488989 PARNO95453 639 aaKnown RBP17.46■□□□□ 0.39
CLDN11-208ENST00000488989 COPB1P53618 953 aaKnown RBP17.46■□□□□ 0.39
CLDN11-208ENST00000488989 DCAF4L1Q3SXM0 396 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 CCDC40Q4G0X9 1142 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 SLC27A1Q6PCB7 646 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 SAAL1Q96ER3 474 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 MFSD14AQ96MC6 490 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 TUBGCP2Q9BSJ2 902 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 TCHPQ9BT92 498 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 OSBPL7Q9BZF2 842 aa17.46■□□□□ 0.39
CLDN11-208ENST00000488989 ARMCX3Q9UH62 379 aaPredicted RBP17.46■□□□□ 0.39
CLDN11-208ENST00000488989 PDCD11Q14690 1871 aaKnown RBP17.46■□□□□ 0.38
CLDN11-208ENST00000488989 A0A1B0GTH6 734 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 ZNF233A6NK53 670 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 ADRB2P07550 413 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 GHRP10912 638 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 MTIF2P46199 727 aaKnown RBP17.45■□□□□ 0.38
CLDN11-208ENST00000488989 PPP2R3AQ06190 1150 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 DSC3Q14574 896 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 GPNMBQ14956 572 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 SNRNP35Q16560 246 aaKnown RBP17.45■□□□□ 0.38
CLDN11-208ENST00000488989 MAN2A1Q16706 1144 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 KYAT1Q16773 422 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 TMEM132AQ24JP5 1023 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 INTS8Q75QN2 995 aaKnown RBP17.45■□□□□ 0.38
CLDN11-208ENST00000488989 APBB1IPQ7Z5R6 666 aaPredicted RBP17.45■□□□□ 0.38
CLDN11-208ENST00000488989 CBWD2Q8IUF1 395 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 ADPGKQ9BRR6 497 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 CPSF3Q9UKF6 684 aaKnown RBP17.45■□□□□ 0.38
CLDN11-208ENST00000488989 PADI3Q9ULW8 664 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 PIN4Q9Y237 131 aaKnown RBP17.45■□□□□ 0.38
CLDN11-208ENST00000488989 ATP11BQ9Y2G3 1177 aa17.45■□□□□ 0.38
CLDN11-208ENST00000488989 GOLGA8IPA6NC78 632 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 GOLGA8JA6NMD2 632 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 SERPINC1P01008 464 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 CLTBP09497 229 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 CD52P31358 61 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 MATR3P43243 847 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLDN11-208ENST00000488989 CYP24A1Q07973 514 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 BFSP1Q12934 665 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 PAK2Q13177 524 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 MIIPQ5JXC2 388 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 UBXN11Q5T124 520 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 ZBTB33Q86T24 672 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 CDR2LQ86X02 465 aaPredicted RBP17.44■□□□□ 0.38
CLDN11-208ENST00000488989 BRSK2Q8IWQ3 736 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 TMC2Q8TDI7 906 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 NAP1L5Q96NT1 182 aaPredicted RBP17.44■□□□□ 0.38
CLDN11-208ENST00000488989 FAM213AQ9BRX8 229 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 TRAIPQ9BWF2 469 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 HIPK3Q9H422 1215 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 TAB2Q9NYJ8 693 aa17.44■□□□□ 0.38
CLDN11-208ENST00000488989 KIAA0355O15063 1070 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 GRM5P41594 1212 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 ACOT2P49753 483 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 UBASH3AP57075 661 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 NR1I3Q14994 352 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 CEP120Q8N960 986 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 RDH13Q8NBN7 331 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 PLEKHO2Q8TD55 490 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 SLC35C1Q96A29 364 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 RTN4Q9NQC3 1192 aaKnown RBP17.43■□□□□ 0.38
CLDN11-208ENST00000488989 IFNKQ9P0W0 207 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 UMODL1Q5DID0 1318 aa17.43■□□□□ 0.38
CLDN11-208ENST00000488989 MICAL3Q7RTP6 2002 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms