RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 NUBP1P53384 320 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 ORC2Q13416 577 aaPredicted RBP28.8■■■□□ 2.2
RNF220-216ENST00000488865 KIAA0319Q5VV43 1072 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 PPP4R3CPQ6ZMV5 832 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 CCDC149Q6ZUS6 474 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 OTOP3Q7RTS5 596 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 GSTCDQ8NEC7 633 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 ACSF2Q96CM8 615 aaPredicted RBP28.8■■■□□ 2.2
RNF220-216ENST00000488865 PRIMPOLQ96LW4 560 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 NACC1Q96RE7 527 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 POLR3CQ9BUI4 534 aaPredicted RBP28.8■■■□□ 2.2
RNF220-216ENST00000488865 RXFP1Q9HBX9 757 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 DPP7Q9UHL4 492 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 LIMCH1Q9UPQ0 1083 aa28.8■■■□□ 2.2
RNF220-216ENST00000488865 LRRIQ4A6NIV6 560 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 TEX28O15482 410 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 ATP2B1P20020 1258 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 DSG1Q02413 1049 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 ELMSAN1Q6PJG2 1045 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 FEZF2Q8TBJ5 459 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 GPRC5CQ9NQ84 441 aa28.79■■■□□ 2.2
RNF220-216ENST00000488865 MED24O75448 989 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 NPTXRO95502 500 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 C1RP00736 705 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 PDGFBP01127 241 aaPredicted RBP28.78■■■□□ 2.2
RNF220-216ENST00000488865 AKAP5P24588 427 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 GUCY1B3Q02153 619 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 CDCA2Q69YH5 1023 aaPredicted RBP28.78■■■□□ 2.2
RNF220-216ENST00000488865 CYP26C1Q6V0L0 522 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 MAEAQ7L5Y9 396 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 GPR65Q8IYL9 337 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 LLPHQ9BRT6 129 aaKnown RBP28.78■■■□□ 2.2
RNF220-216ENST00000488865 RHOBTB2Q9BYZ6 727 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 IRF2BPLQ9H1B7 796 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 MAN1C1Q9NR34 630 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 CHST7Q9NS84 486 aa28.78■■■□□ 2.2
RNF220-216ENST00000488865 PRMT7Q9NVM4 692 aaPredicted RBP28.78■■■□□ 2.2
RNF220-216ENST00000488865 GRIK3Q13003 919 aa28.77■■■□□ 2.2
RNF220-216ENST00000488865 FAM187BQ17R55 369 aa28.77■■■□□ 2.2
RNF220-216ENST00000488865 CDR2LQ86X02 465 aaPredicted RBP28.77■■■□□ 2.2
RNF220-216ENST00000488865 ZBTB8OSQ8IWT0 167 aa28.77■■■□□ 2.2
RNF220-216ENST00000488865 C8orf76Q96K31 380 aa28.77■■■□□ 2.2
RNF220-216ENST00000488865 FOXP1Q9H334 677 aaPredicted RBP28.77■■■□□ 2.2
RNF220-216ENST00000488865 FZD8Q9H461 694 aa28.77■■■□□ 2.2
RNF220-216ENST00000488865 SEC24BO95487 1268 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 GLUD1P00367 558 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 OR52Z1P0C646 297 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 RPA1P27694 616 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 ERMNQ8TAM6 284 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 HDAC7Q8WUI4 952 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 C2orf40Q9H1Z8 148 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 SMOC2Q9H3U7 446 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 PARP2Q9UGN5 583 aa28.76■■■□□ 2.19
RNF220-216ENST00000488865 C2orf16Q68DN1 1984 aa28.75■■■□□ 2.19
RNF220-216ENST00000488865 F8W810 466 aa28.75■■■□□ 2.19
RNF220-216ENST00000488865 FUT10Q6P4F1 479 aa28.75■■■□□ 2.19
RNF220-216ENST00000488865 CCDC83Q8IWF9 413 aa28.75■■■□□ 2.19
RNF220-216ENST00000488865 PHOX2BQ99453 314 aa28.75■■■□□ 2.19
RNF220-216ENST00000488865 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.75■■■□□ 2.19
RNF220-216ENST00000488865 MUTP22033 750 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 USP41Q3LFD5 358 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 PADI6Q6TGC4 694 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 GPR62Q9BZJ7 368 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 KLK14Q9P0G3 267 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 ADAM28Q9UKQ2 775 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 PLXNA3P51805 1871 aa28.74■■■□□ 2.19
RNF220-216ENST00000488865 CCDC195A0A1B0GUA6 201 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 N4BP3O15049 544 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 PAPLNO95428 1278 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 CYP11B2P19099 503 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 ZNF174Q15697 407 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 POTEGQ6S5H5 508 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 FBXO18Q8NFZ0 1043 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 PLEKHA4Q9H4M7 779 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 FNIP2Q9P278 1114 aa28.73■■■□□ 2.19
RNF220-216ENST00000488865 DAXXQ9UER7 740 aaPredicted RBP28.73■■■□□ 2.19
RNF220-216ENST00000488865 ARHGEF35A5YM69 484 aa28.72■■■□□ 2.19
RNF220-216ENST00000488865 HMGN5P82970 282 aaKnown RBP28.72■■■□□ 2.19
RNF220-216ENST00000488865 CREMQ03060 361 aa28.72■■■□□ 2.19
RNF220-216ENST00000488865 MAPK6Q16659 721 aa28.72■■■□□ 2.19
RNF220-216ENST00000488865 WDR6Q9NNW5 1121 aaKnown RBP28.72■■■□□ 2.19
RNF220-216ENST00000488865 NAMPTP43490 491 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 TRAPPC10P48553 1259 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 RBM25P49756 843 aaKnown RBP28.71■■■□□ 2.19
RNF220-216ENST00000488865 PRPF4BQ13523 1007 aaKnown RBP28.71■■■□□ 2.19
RNF220-216ENST00000488865 TDGQ13569 410 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 TTC38Q5R3I4 469 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 HAUS3Q68CZ6 603 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 BSNDQ8WZ55 320 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 STAMQ92783 540 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 PDZD7Q9H5P4 517 aa28.71■■■□□ 2.19
RNF220-216ENST00000488865 CACNA1HO95180 2353 aa28.7■■■□□ 2.19
RNF220-216ENST00000488865 ACKR2O00590 384 aa28.7■■■□□ 2.18
RNF220-216ENST00000488865 GALR2O43603 387 aaPredicted RBP28.7■■■□□ 2.18
RNF220-216ENST00000488865 TADA2AO75478 443 aa28.7■■■□□ 2.18
RNF220-216ENST00000488865 TUSC3Q13454 348 aa28.7■■■□□ 2.18
RNF220-216ENST00000488865 HSP90AA2PQ14568 343 aaPredicted RBP28.7■■■□□ 2.18
RNF220-216ENST00000488865 PPP2R5AQ15172 486 aa28.7■■■□□ 2.18
RNF220-216ENST00000488865 RIN2Q8WYP3 895 aaPredicted RBP28.7■■■□□ 2.18
RNF220-216ENST00000488865 B3GALT6Q96L58 329 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms