RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 UBIAD1Q9Y5Z9 338 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
CLIC4-202ENST00000488683 TBC1D12O60347 775 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 KRT5P13647 590 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 PTENP60484 403 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SLC29A2Q14542 456 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
CLIC4-202ENST00000488683 ZDHHC24Q6UX98 284 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 DLK2Q6UY11 383 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 ANO5Q75V66 913 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 NEK9Q8TD19 979 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 EPS8L3Q8TE67 593 aaKnown RBP13.64□□□□□ -0.23
CLIC4-202ENST00000488683 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 LRRC45Q96CN5 670 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 CARD9Q9H257 536 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
CLIC4-202ENST00000488683 DENND3A2RUS2 1198 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 CLDN3O15551 220 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 ERLIN2O94905 339 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 FMO1Q01740 532 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SLC20A2Q08357 652 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 PRKG1Q13976 671 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SLC39A4Q6P5W5 647 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 LRIG3Q6UXM1 1119 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 TMEM130Q8N3G9 435 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 ZNF653Q96CK0 615 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 ACCSQ96QU6 501 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SELENOSQ9BQE4 189 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 AZI2Q9H6S1 392 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 TMEM206Q9H813 350 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 DBR1Q9UK59 544 aaKnown RBP13.64□□□□□ -0.23
CLIC4-202ENST00000488683 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
CLIC4-202ENST00000488683 SPOPO43791 374 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ASNSP08243 561 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CCDC172P0C7W6 258 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 DPEP1P16444 411 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 GTF2BQ00403 316 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 MYBPC2Q14324 1141 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 PGM5Q15124 567 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 C1orf131Q8NDD1 294 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 RAPGEF5Q92565 580 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ZKSCAN4Q969J2 545 aaPredicted RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ERP44Q9BS26 406 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ZDHHC18Q9NUE0 388 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 NOCTQ9UK39 431 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 PFASO15067 1338 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CREB1P16220 341 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CNGA1P29973 690 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 NPTX2P47972 431 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 IFNAR2P48551 515 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 PCNX4Q63HM2 1172 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CCDC137Q6PK04 289 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ATG4CQ96DT6 458 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 DDX23Q9BUQ8 820 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 SLC12A6Q9UHW9 1150 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ZNF862O60290 1169 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 GPC5P78333 572 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CXCL9Q07325 125 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 FSTL1Q12841 308 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 BAATQ14032 418 aaPredicted RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 C12orf56Q8IXR9 622 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CCDC105Q8IYK2 499 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 PRPF38AQ8NAV1 312 aaKnown RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ZNF564Q8TBZ8 553 aaPredicted RBP13.63□□□□□ -0.23
CLIC4-202ENST00000488683 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 ZSWIM1Q9BR11 485 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 FAM213AQ9BRX8 229 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 GRHL1Q9NZI5 618 aa13.63□□□□□ -0.23
CLIC4-202ENST00000488683 HGSO14964 777 aaPredicted RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 RARAP10276 462 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 HARSP12081 509 aaKnown RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 RFX1P22670 979 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 PTGIRP43119 386 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 MGARPQ8TDB4 240 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 ADAM33Q9BZ11 813 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 TXLNGYQ9BZA5 131 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 GABBR1Q9UBS5 961 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 CTNNAL1Q9UBT7 734 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 ACOT2P49753 483 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 PEX5P50542 639 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
CLIC4-202ENST00000488683 LRRC14Q15048 493 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 SEPT14Q6ZU15 432 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 FAM83AQ86UY5 434 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 RHOT2Q8IXI1 618 aa13.62□□□□□ -0.23
CLIC4-202ENST00000488683 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms