RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-207ENST00000488591 HERC4Q5GLZ8 1057 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-207ENST00000488591 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 ZPBP2Q6X784 338 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 TAS1R3Q7RTX0 852 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 CEP57L1Q8IYX8 460 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 KCNN1Q92952 543 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 RPS6KC1Q96S38 1066 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 GAD1Q99259 594 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 ALG13Q9NP73 1137 aaKnown RBP16.52■□□□□ 0.24
CXCL12-207ENST00000488591 KBTBD4Q9NVX7 518 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 SPG21Q9NZD8 308 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 HCSTQ9UBK5 93 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 PUF60Q9UHX1 559 aaKnown RBP16.52■□□□□ 0.24
CXCL12-207ENST00000488591 TBX20Q9UMR3 447 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 TRANK1O15050 2925 aa16.52■□□□□ 0.23
CXCL12-207ENST00000488591 ZMYM2Q9UBW7 1377 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 TCHHQ07283 1943 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 GRM6O15303 877 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 ZC3H11AO75152 810 aaKnown RBP eCLIP16.51■□□□□ 0.23
CXCL12-207ENST00000488591 TOM1L1O75674 476 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 FGF18O76093 207 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 POMCP01189 267 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 ITGB1P05556 798 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 MCF2P10911 925 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 MLH1P40692 756 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
CXCL12-207ENST00000488591 BCAR1P56945 870 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 UBE3AQ05086 875 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 ZNF568Q3ZCX4 644 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 MPZL3Q6UWV2 235 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 SFR1Q86XK3 245 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 SPPL3Q8TCT6 385 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 STAMQ92783 540 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 CCDC94Q9BW85 323 aaPredicted RBP16.51■□□□□ 0.23
CXCL12-207ENST00000488591 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 NRDE2Q9H7Z3 1164 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 MRPL44Q9H9J2 332 aaKnown RBP16.51■□□□□ 0.23
CXCL12-207ENST00000488591 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 SNTG2Q9NY99 539 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 USP25Q9UHP3 1055 aa16.51■□□□□ 0.23
CXCL12-207ENST00000488591 A0A1B0GVL5 298 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 A0A1W2PQ27 194 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 A0A1W2PQ64 194 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 A0A1W2PQD8 194 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 GOLGA6L4A6NEF3 574 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 INPPL1O15357 1258 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 NR1I2O75469 434 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 ALDH2P05091 517 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 PFKFB1P16118 471 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 NMT1P30419 496 aaKnown RBP16.5■□□□□ 0.23
CXCL12-207ENST00000488591 LIG4P49917 911 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
CXCL12-207ENST00000488591 GTF2BQ00403 316 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 PLCB3Q01970 1234 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 TIGD5Q53EQ6 642 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 ZNF720Q7Z2F6 126 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 ZBTB33Q86T24 672 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 POF1BQ8WVV4 589 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 ZFP42Q96MM3 310 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 ST6GALNAC4Q9H4F1 302 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 PTPRHQ9HD43 1115 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 KLK14Q9P0G3 267 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
CXCL12-207ENST00000488591 CLDN3O15551 220 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 SLFN14P0C7P3 912 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 PROZP22891 400 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 GRM5P41594 1212 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 SCNN1GP51170 649 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 ASIC1P78348 528 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
CXCL12-207ENST00000488591 SKIV2LQ15477 1246 aaKnown RBP16.49■□□□□ 0.23
CXCL12-207ENST00000488591 TPRNQ4KMQ1 711 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 ZNF280BQ86YH2 543 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 SLC39A11Q8N1S5 342 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 MICAL1Q8TDZ2 1067 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 MRPS27Q92552 414 aaKnown RBP16.49■□□□□ 0.23
CXCL12-207ENST00000488591 PPP2R3CQ969Q6 453 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 HVCN1Q96D96 273 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 TMEM169Q96HH4 297 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 C7orf25Q9BPX7 421 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 TRIM9Q9C026 710 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 CDT1Q9H211 546 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 OLFML3Q9NRN5 406 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
CXCL12-207ENST00000488591 ANKFY1Q9P2R3 1169 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 EXOC7Q9UPT5 735 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 LZTS1Q9Y250 596 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 FAN1Q9Y2M0 1017 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
CXCL12-207ENST00000488591 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 RECQL4O94761 1208 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 DDHD2O94830 711 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 GALTP07902 379 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms