RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ADI1Q9BV57 179 aa6.46□□□□□ -1.38
VPS8-224ENST00000488255 CPEB1Q9BZB8 566 aaKnown RBP6.46□□□□□ -1.38
VPS8-224ENST00000488255 SCAND2PQ9GZW5 306 aaPredicted RBP6.46□□□□□ -1.38
VPS8-224ENST00000488255 CCDC8Q9H0W5 538 aaPredicted RBP6.46□□□□□ -1.38
VPS8-224ENST00000488255 CEP72Q9P209 647 aa6.46□□□□□ -1.38
VPS8-224ENST00000488255 PRR5-ARHGAP8B1AHC4 643 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 PHF2O75151 1096 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 KATNA1O75449 491 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 GSPT1P15170 499 aaKnown RBP6.45□□□□□ -1.38
VPS8-224ENST00000488255 TUBA3CQ13748 450 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 ACAP2Q15057 778 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 PRAMEF14Q5SWL7 426 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 IGFL4Q6B9Z1 124 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 TUBA3EQ6PEY2 450 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 SLC16A11Q8NCK7 471 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 CEP95Q96GE4 821 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 FAM193BQ96PV7 902 aaPredicted RBP6.45□□□□□ -1.38
VPS8-224ENST00000488255 PUS7LQ9H0K6 701 aaKnown RBP6.45□□□□□ -1.38
VPS8-224ENST00000488255 LDAHQ9H6V9 325 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 GREM2Q9H772 168 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 SLC2A4RGQ9NR83 387 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 EIF2B4Q9UI10 523 aaKnown RBP6.45□□□□□ -1.38
VPS8-224ENST00000488255 SORCS3Q9UPU3 1222 aa6.45□□□□□ -1.38
VPS8-224ENST00000488255 FZD7O75084 574 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 ZNF202O95125 648 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 MYBL2P10244 700 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 ECHS1P30084 290 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 GDF5P43026 501 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 SLC5A3P53794 718 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 PTTG1IPP53801 180 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 ABCB5Q2M3G0 1257 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 MBNL2Q5VZF2 373 aaKnown RBP6.44□□□□□ -1.38
VPS8-224ENST00000488255 FAM180AQ6UWF9 173 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 Q6ZVL8 140 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
VPS8-224ENST00000488255 ZFPM1Q8IX07 1006 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 PRPF38AQ8NAV1 312 aaKnown RBP6.44□□□□□ -1.38
VPS8-224ENST00000488255 RNF169Q8NCN4 708 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 CPT1CQ8TCG5 803 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 CACTINQ8WUQ7 758 aaKnown RBP6.44□□□□□ -1.38
VPS8-224ENST00000488255 STON2Q8WXE9 905 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 KRTAP4-11Q9BYQ6 195 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 RBM12Q9NTZ6 932 aaKnown RBP6.44□□□□□ -1.38
VPS8-224ENST00000488255 MKS1Q9NXB0 559 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 TRHDEQ9UKU6 1024 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 GPR45Q9Y5Y3 372 aa6.44□□□□□ -1.38
VPS8-224ENST00000488255 SCAF4O95104 1147 aaKnown RBP6.43□□□□□ -1.38
VPS8-224ENST00000488255 MTNR1BP49286 362 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 SLC25A3Q00325 362 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 PPP3CAQ08209 521 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 MALLQ13021 153 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 TOB2Q14106 344 aaPredicted RBP6.43□□□□□ -1.38
VPS8-224ENST00000488255 MST1LQ2TV78 715 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 MFSD14BQ5SR56 506 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 USP51Q70EK9 711 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 NECAB2Q7Z6G3 386 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 PQLC1Q8N2U9 271 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 PHACTR3Q96KR7 559 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 POGKQ9P215 609 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 TRPS1Q9UHF7 1281 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 COL4A3BPQ9Y5P4 624 aa6.43□□□□□ -1.38
VPS8-224ENST00000488255 XPOTO43592 962 aaKnown RBP6.42□□□□□ -1.38
VPS8-224ENST00000488255 AKAP8O43823 692 aaKnown RBP6.42□□□□□ -1.38
VPS8-224ENST00000488255 GASTP01350 101 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 APOBEC3AP31941 199 aaPredicted RBP6.42□□□□□ -1.38
VPS8-224ENST00000488255 CRHR1P34998 444 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 MTMR1Q13613 665 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 VPS72Q15906 364 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 DCAF17Q5H9S7 520 aaPredicted RBP6.42□□□□□ -1.38
VPS8-224ENST00000488255 RABL3Q5HYI8 236 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 OR7D4Q8NG98 312 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 OR52N2Q8NGI0 321 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 DPF2Q92785 391 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 SENP6Q9GZR1 1112 aaPredicted RBP6.42□□□□□ -1.38
VPS8-224ENST00000488255 ZNF703Q9H7S9 590 aaPredicted RBP6.42□□□□□ -1.38
VPS8-224ENST00000488255 MMRN2Q9H8L6 949 aa6.42□□□□□ -1.38
VPS8-224ENST00000488255 RAP2AP10114 183 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 AGXTP21549 392 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 MCAMP43121 646 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 RAP2BP61225 183 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 ANO4Q32M45 955 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 SYDE2Q5VT97 1194 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 EFCAB12Q6NXP0 572 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 DOK3Q7L591 496 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 TRMT2AQ8IZ69 625 aaKnown RBP6.41□□□□□ -1.38
VPS8-224ENST00000488255 CBARPQ8N350 705 aaPredicted RBP6.41□□□□□ -1.38
VPS8-224ENST00000488255 SLC35B2Q8TB61 432 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 TFAP2CQ92754 450 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 SMAD5Q99717 465 aaKnown RBP6.41□□□□□ -1.38
VPS8-224ENST00000488255 MENTQ9BUN1 341 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 KRTAP4-2Q9BYR5 136 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 BCO1Q9HAY6 547 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 PCDH12Q9NPG4 1184 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 SRRDQ9UH36 339 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 SCOCQ9UIL1 159 aa6.41□□□□□ -1.38
VPS8-224ENST00000488255 B5MCH6 92 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 K7ESF4 209 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 LEFTY2O00292 366 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 WNT10BO00744 389 aa6.4□□□□□ -1.38
VPS8-224ENST00000488255 NARSO43776 548 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms