RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZPBP2Q6X784 338 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 AGMOQ6ZNB7 445 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 TIFAQ96CG3 184 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 HVCN1Q96D96 273 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 TIGD1Q96MW7 591 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 RAD9AQ99638 391 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 ADPGKQ9BRR6 497 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 HAPLN2Q9GZV7 340 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 ELAC1Q9H777 363 aaKnown RBP12.11□□□□□ -0.47
UBE4B-210ENST00000488228 PTPRHQ9HD43 1115 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 MSRAQ9UJ68 235 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 INPP5FQ9Y2H2 1132 aa12.11□□□□□ -0.47
UBE4B-210ENST00000488228 GOLGA6L22H0YM25 854 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ZNF623O75123 536 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 TOM1L1O75674 476 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 RECQL4O94761 1208 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 PIGRP01833 764 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ITGA4P13612 1032 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 SCP2P22307 547 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 AKAP5P24588 427 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 HOXD13P35453 343 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 MLH1P40692 756 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 FXR1P51114 621 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 OSTNP61366 133 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 STK4Q13043 487 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ALCAMQ13740 583 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 BTG3Q14201 252 aaPredicted RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 SEZ6Q53EL9 994 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 NELFCDQ8IXH7 590 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ABI1Q8IZP0 508 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 GPT2Q8TD30 523 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 SCFD1Q8WVM8 642 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ZNF689Q96CS4 500 aaPredicted RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 ACCSQ96QU6 501 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 KLK14Q9P0G3 267 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 MTUS1Q9ULD2 1270 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 GDAQ9Y2T3 454 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 INSL6Q9Y581 213 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
UBE4B-210ENST00000488228 UBE4BO95155 1302 aa12.1□□□□□ -0.47
UBE4B-210ENST00000488228 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBE4B-210ENST00000488228 HOXA2O43364 376 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 EOMESO95936 686 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 MCF2P10911 925 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 SKIP12755 728 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 ABCD1P33897 745 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 AFF1P51825 1210 aaKnown RBP12.09□□□□□ -0.47
UBE4B-210ENST00000488228 TAP1Q03518 808 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 CAMK4Q16566 473 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 ZBTB41Q5SVQ8 909 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 GLB1LQ6UWU2 654 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 STXBP4Q6ZWJ1 553 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 TMEM192Q8IY95 271 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 THNSL1Q8IYQ7 743 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
UBE4B-210ENST00000488228 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
UBE4B-210ENST00000488228 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 PGBD4Q96DM1 585 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 GAD1Q99259 594 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 TMEM117Q9H0C3 514 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 CXCL16Q9H2A7 254 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 CERS4Q9HA82 394 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 SNTG2Q9NY99 539 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 PARP2Q9UGN5 583 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
UBE4B-210ENST00000488228 CLDN3O15551 220 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 MEFVO15553 781 aaPredicted RBP12.08□□□□□ -0.48
UBE4B-210ENST00000488228 FAM189A1O60320 539 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 B4GALT3O60512 393 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 RHOBTB3O94955 611 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 SMC2O95347 1197 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 TNFSF9P41273 254 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 SCNN1GP51170 649 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 MCL1Q07820 350 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 KCNB1Q14721 858 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 BMT2Q1RMZ1 405 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 APBB1IPQ7Z5R6 666 aaPredicted RBP12.08□□□□□ -0.48
UBE4B-210ENST00000488228 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 FIBCD1Q8N539 461 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 CCDC47Q96A33 483 aaKnown RBP12.08□□□□□ -0.48
UBE4B-210ENST00000488228 C17orf80Q9BSJ5 609 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
UBE4B-210ENST00000488228 CLSTN2Q9H4D0 955 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 SLC28A3Q9HAS3 691 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 TBC1D13Q9NVG8 400 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms