RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 HACE1Q8IYU2 909 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 CACTIN-AS1Q8N1I8 211 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 STAG2Q8N3U4 1231 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 DBF4BQ8NFT6 615 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 KCNB2Q92953 911 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 HHIPQ96QV1 700 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 BCO2Q9BYV7 579 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ATP6V0A4Q9HBG4 840 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 RIC8AQ9NPQ8 531 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 PDGFCQ9NRA1 345 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 DMGDHQ9UI17 866 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 PCDHB7Q9Y5E2 793 aa3.09□□□□□ -1.91
DEPDC1-203ENST00000488146 ARID2Q68CP9 1835 aa3.09□□□□□ -1.92
DEPDC1-203ENST00000488146 PTPDC1A2A3K4 754 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 WIPF1O43516 503 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CLASP2O75122 1294 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 PHACTR2O75167 634 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 SASH3O75995 380 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 GGPS1O95749 300 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 LMNAP02545 664 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CHRNA1P02708 482 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 ITGB1P05556 798 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 XRCC6P12956 609 aaKnown RBP eCLIP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TDGF1P13385 188 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TDGQ13569 410 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 KYAT1Q16773 422 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM187BQ17R55 369 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 SPDYCQ5MJ68 293 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CWF19L1Q69YN2 538 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 NSMFQ6X4W1 530 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CCDC81Q6ZN84 652 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 HFE2Q6ZVN8 426 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 HS2ST1Q7LGA3 356 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 SPICE1Q8N0Z3 855 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CELF5Q8N6W0 485 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MRPL43Q8N983 215 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 ZBTB44Q8NCP5 570 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 LMBR1Q8WVP7 490 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 RRP36Q96EU6 259 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 SCLYQ96I15 445 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CEP63Q96MT8 703 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MXRA8Q9BRK3 442 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 SDF4Q9BRK5 362 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 GPR88Q9GZN0 384 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CHRDQ9H2X0 955 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MLXIPQ9HAP2 919 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 ZSCAN32Q9NX65 697 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 DKK4Q9UBT3 224 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 STK17AQ9UEE5 414 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MAD2L2Q9UI95 211 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MRPL42Q9Y6G3 142 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TRIOBPQ9H2D6 2365 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF318Q5VUA4 2279 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 A0A0U1RQF3 1178 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 DCDC2BA2VCK2 349 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TGFBR3LH3BV60 316 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 NOP56O00567 594 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TERTO14746 1132 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF213O14771 459 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 XYLBO75191 536 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 ARHGEF15O94989 841 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 GLP2RO95838 553 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 BMP2P12643 396 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 GCFC2P16383 781 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 NCLP19338 710 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 KCNA5P22460 613 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MCCP23508 829 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TMOD1P28289 359 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 HOXD12P35452 270 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 THPOP40225 353 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 USP11P51784 963 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 PLD1Q13393 1074 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 BTG3Q14201 252 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 GRM2Q14416 872 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 KRT32Q14532 448 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TCTN1Q2MV58 587 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 Q4G0T1 1027 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 MTHFD1LQ6UB35 978 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 RABEPKQ7Z6M1 372 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 WDR5BQ86VZ2 330 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 LINC00528Q8N1L1 170 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 DEPDC1BQ8WUY9 529 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 LINC01599Q8WXQ3 324 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CASD1Q96PB1 797 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TAAR1Q96RJ0 339 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 C17orf80Q9BSJ5 609 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TIPINQ9BVW5 301 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 BCL11AQ9H165 835 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 BOLA2Q9H3K6 86 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 C12orf49Q9H741 205 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 DLGAP2Q9P1A6 1054 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TCEAL9Q9UHQ7 104 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 TUBE1Q9UJT0 475 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHA1Q9Y5I3 950 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CDY2AQ9Y6F7 541 aa3.08□□□□□ -1.92
DEPDC1-203ENST00000488146 CCDC196A0A1B0GTZ2 297 aa3.07□□□□□ -1.92
DEPDC1-203ENST00000488146 GSTTP1A0A1W2PQM5 241 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms