RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PCDHGC5Q9Y5F6 944 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 FSCN2O14926 492 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 GALTP07902 379 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 MAPTP10636 758 aaKnown RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 SLC11A1P49279 550 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 ERVFC1P60507 584 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 DNM1Q05193 864 aaKnown RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 HYAL1Q12794 435 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 DCAF4L1Q3SXM0 396 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 ADGRD2Q7Z7M1 963 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 GSTCDQ8NEC7 633 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 BCL7CQ8WUZ0 217 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 HLA-CQ95604 372 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 ACO2Q99798 780 aaKnown RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 UBE2ZQ9H832 354 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 KANSL3Q9P2N6 904 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 DAXXQ9UER7 740 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-212ENST00000487894 TNFSF13BQ9Y275 285 aa18.74■□□□□ 0.59
HMG20B-212ENST00000487894 ANK1P16157 1881 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.73■□□□□ 0.59
HMG20B-212ENST00000487894 CUTAO60888 179 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 FAM13AO94988 1023 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 KRT18P05783 430 aaKnown RBP18.73■□□□□ 0.59
HMG20B-212ENST00000487894 SMTNP53814 917 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 DSC1Q08554 894 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 BECN1Q14457 450 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 CCDC73Q6ZRK6 1079 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 KCNN1Q92952 543 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 TMEM175Q9BSA9 504 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 TARS2Q9BW92 718 aaKnown RBP18.73■□□□□ 0.59
HMG20B-212ENST00000487894 MRPL4Q9BYD3 311 aaKnown RBP18.73■□□□□ 0.59
HMG20B-212ENST00000487894 PARVGQ9HBI0 331 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 PTPRHQ9HD43 1115 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 SNTG2Q9NY99 539 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 KLK14Q9P0G3 267 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 PARP2Q9UGN5 583 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 KCNG1Q9UIX4 513 aa18.73■□□□□ 0.59
HMG20B-212ENST00000487894 CARNS1A5YM72 827 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 ABLIM1O14639 778 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 TBCAO75347 108 aaKnown RBP18.72■□□□□ 0.59
HMG20B-212ENST00000487894 RECQL4O94761 1208 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 PROZP22891 400 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 GTF2F1P35269 517 aaKnown RBP eCLIP18.72■□□□□ 0.59
HMG20B-212ENST00000487894 STAT6P42226 847 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 MRPS5P82675 430 aaKnown RBP18.72■□□□□ 0.59
HMG20B-212ENST00000487894 KRT17Q04695 432 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 AXDND1Q5T1B0 1012 aaPredicted RBP18.72■□□□□ 0.59
HMG20B-212ENST00000487894 SHC4Q6S5L8 630 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 COLGALT2Q8IYK4 626 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 PDILTQ8N807 584 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 KCNG4Q8TDN1 519 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 PABPC5Q96DU9 382 aaKnown RBP18.72■□□□□ 0.59
HMG20B-212ENST00000487894 TMEM169Q96HH4 297 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 IGSF21Q96ID5 467 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 FAM193BQ96PV7 902 aaPredicted RBP18.72■□□□□ 0.59
HMG20B-212ENST00000487894 ASB2Q96Q27 587 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 FIZ1Q96SL8 496 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 CDT1Q9H211 546 aa18.72■□□□□ 0.59
HMG20B-212ENST00000487894 MYMKA6NI61 221 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 H0YCG3 227 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 K7ENM7 598 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 GRIK3Q13003 919 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 STRN3Q13033 797 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 CTC1Q2NKJ3 1217 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 ZNF568Q3ZCX4 644 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 TJAP1Q5JTD0 557 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 PLPP4Q5VZY2 271 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 DYMQ7RTS9 669 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 HAUS6Q7Z4H7 955 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 MYCT1Q8N699 235 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 CEP120Q8N960 986 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 TCF25Q9BQ70 676 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 VN1R3Q9BXE9 311 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 PANK2Q9BZ23 570 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 CXCL16Q9H2A7 254 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 PUF60Q9UHX1 559 aaKnown RBP18.71■□□□□ 0.59
HMG20B-212ENST00000487894 CFAP45Q9UL16 551 aa18.71■□□□□ 0.59
HMG20B-212ENST00000487894 VWA8A3KMH1 1905 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 PTGESO14684 152 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 NRP1O14786 923 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 KCNQ1P51787 676 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 PLXNA3P51805 1871 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 E2F4Q16254 413 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 PDE12Q6L8Q7 609 aaKnown RBP18.7■□□□□ 0.58
HMG20B-212ENST00000487894 MPZL3Q6UWV2 235 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 SV2BQ7L1I2 683 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 APBB1IPQ7Z5R6 666 aaPredicted RBP18.7■□□□□ 0.58
HMG20B-212ENST00000487894 DDX12PQ92771 950 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 PPP2R3CQ969Q6 453 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 DNAJC19Q96DA6 116 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 RPS6KC1Q96S38 1066 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 ZHX3Q9H4I2 956 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 ENTPD7Q9NQZ7 604 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 MARCH5Q9NX47 278 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 CLDND1Q9NY35 253 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 PCDHA7Q9UN72 937 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms