RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SLC12A3P55017 1021 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 RAD51AP2Q09MP3 1159 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 SMAD4Q13485 552 aaKnown RBP22.51■■□□□ 1.19
HDAC4-209ENST00000487617 EEF1DP3Q658K8 133 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 FAM173BQ6P4H8 233 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 HSCBQ8IWL3 235 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 COLGALT2Q8IYK4 626 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 RASSF8Q8NHQ8 419 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 RPS6KC1Q96S38 1066 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 ZBP1Q9H171 429 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 C17orf75Q9HAS0 396 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 PRG3Q9Y2Y8 225 aaPredicted RBP22.51■■□□□ 1.19
HDAC4-209ENST00000487617 STX6O43752 255 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 SRGAP2BP0DMP2 458 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 OR1G1P47890 313 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 DSC1Q08554 894 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 NT5DC1Q5TFE4 455 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 ATF7IP2Q5U623 682 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 LLGL2Q6P1M3 1020 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 AUTS2Q8WXX7 1259 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 SNTG2Q9NY99 539 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 KCND2Q9NZV8 630 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 RBM19Q9Y4C8 960 aaKnown RBP22.5■■□□□ 1.19
HDAC4-209ENST00000487617 PHLPP2Q6ZVD8 1323 aa22.5■■□□□ 1.19
HDAC4-209ENST00000487617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.49■■□□□ 1.19
HDAC4-209ENST00000487617 NR1I2O75469 434 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 CTSAP10619 480 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 MARCKSP29966 332 aaPredicted RBP22.49■■□□□ 1.19
HDAC4-209ENST00000487617 CEBPZQ03701 1054 aaKnown RBP22.49■■□□□ 1.19
HDAC4-209ENST00000487617 COASYQ13057 564 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 KARSQ15046 597 aaKnown RBP22.49■■□□□ 1.19
HDAC4-209ENST00000487617 PTPAQ15257 358 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 DCAF4L1Q3SXM0 396 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 TMEM87AQ8NBN3 555 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 GSTCDQ8NEC7 633 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 VN1R3Q9BXE9 311 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 TMEM134Q9H6X4 195 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 ARHGAP28Q9P2N2 729 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 STK39Q9UEW8 545 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 ZMYM2Q9UBW7 1377 aa22.49■■□□□ 1.19
HDAC4-209ENST00000487617 SLC16A4O15374 487 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 PLS3P13797 630 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 SSTR3P32745 418 aaPredicted RBP22.48■■□□□ 1.19
HDAC4-209ENST00000487617 GRIK3Q13003 919 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 KCNC3Q14003 757 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 DHX8Q14562 1220 aaKnown RBP22.48■■□□□ 1.19
HDAC4-209ENST00000487617 SMAD2Q15796 467 aaKnown RBP22.48■■□□□ 1.19
HDAC4-209ENST00000487617 APBB1IPQ7Z5R6 666 aaPredicted RBP22.48■■□□□ 1.19
HDAC4-209ENST00000487617 SMRP1Q8NCR6 262 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 ZSCAN16Q9H4T2 348 aaPredicted RBP22.48■■□□□ 1.19
HDAC4-209ENST00000487617 CD320Q9NPF0 282 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 MARCH5Q9NX47 278 aa22.48■■□□□ 1.19
HDAC4-209ENST00000487617 NPHP3-ACAD11A0A0J9YXS1 232 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 CLASP2O75122 1294 aaKnown RBP22.47■■□□□ 1.19
HDAC4-209ENST00000487617 RECQL4O94761 1208 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 HSP90AA1P07900 732 aaKnown RBP22.47■■□□□ 1.19
HDAC4-209ENST00000487617 PLCG1P19174 1290 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 GIT2Q14161 759 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 TMEM184AQ6ZMB5 413 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 TAS1R3Q7RTX0 852 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 GPBP1Q86WP2 473 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 GJD3Q8N144 294 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 SPIRE2Q8WWL2 714 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 MRPL4Q9BYD3 311 aaKnown RBP22.47■■□□□ 1.19
HDAC4-209ENST00000487617 DAXXQ9UER7 740 aaPredicted RBP22.47■■□□□ 1.19
HDAC4-209ENST00000487617 PRKAG3Q9UGI9 489 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 KCNG1Q9UIX4 513 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 TNFSF13BQ9Y275 285 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 GDAQ9Y2T3 454 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 IRAK3Q9Y616 596 aa22.47■■□□□ 1.19
HDAC4-209ENST00000487617 SMTNP53814 917 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 CACNB1Q02641 598 aaPredicted RBP22.46■■□□□ 1.19
HDAC4-209ENST00000487617 ARSHQ5FYA8 562 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 SPECC1Q5M775 1068 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 ANKRD54Q6NXT1 300 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 LRRC15Q8TF66 581 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 RAD54LQ92698 747 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 ACO2Q99798 780 aaKnown RBP22.46■■□□□ 1.19
HDAC4-209ENST00000487617 NTPCRQ9BSD7 190 aaKnown RBP22.46■■□□□ 1.19
HDAC4-209ENST00000487617 COLEC11Q9BWP8 271 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 CCSER1Q9C0I3 900 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 BLOC1S4Q9NUP1 217 aa22.46■■□□□ 1.19
HDAC4-209ENST00000487617 FBXO2Q9UK22 296 aaPredicted RBP22.46■■□□□ 1.19
HDAC4-209ENST00000487617 SRPRBQ9Y5M8 271 aaKnown RBP22.46■■□□□ 1.19
HDAC4-209ENST00000487617 NCOR1O75376 2440 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 ZP2Q05996 745 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 STRN3Q13033 797 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 MCM6Q14566 821 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 PTPN14Q15678 1187 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 ADHFE1Q8IWW8 467 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 CASP10Q92851 521 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 EPSTI1Q96J88 318 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 USP28Q96RU2 1077 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 TARS2Q9BW92 718 aaKnown RBP22.45■■□□□ 1.18
HDAC4-209ENST00000487617 USP15Q9Y4E8 981 aaPredicted RBP22.45■■□□□ 1.18
HDAC4-209ENST00000487617 HCFC2Q9Y5Z7 792 aa22.45■■□□□ 1.18
HDAC4-209ENST00000487617 F8W810 466 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 PTGESO14684 152 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 SOD2P04179 222 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 THP07101 528 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms