RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ARID2Q68CP9 1835 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 INO80B-WBP1J3KQ70 363 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 TGM5O43548 720 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 NR1I2O75469 434 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 MXD4Q14582 209 aaPredicted RBP21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 AMHR2Q16671 573 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 FUT10Q6P4F1 479 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 POTEGQ6S5H5 508 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 IFNLR1Q8IU57 520 aaPredicted RBP21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 GPR62Q9BZJ7 368 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 NT5C3AQ9H0P0 336 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 NXF3Q9H4D5 531 aaKnown RBP21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 PLEKHA4Q9H4M7 779 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 PIDD1Q9HB75 910 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 GIT1Q9Y2X7 761 aa21.65■■□□□ 1.06
SMPDL3A-202ENST00000487215 MARCH6O60337 910 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 C1RP00736 705 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 MBTD1Q05BQ5 628 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 NCBP1Q09161 790 aaKnown RBP21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 PIK3AP1Q6ZUJ8 805 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 GET4Q7L5D6 327 aaPredicted RBP21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 GLYCTKQ8IVS8 523 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 GSTCDQ8NEC7 633 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 OXER1Q8TDS5 423 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 GPR152Q8TDT2 470 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 GJB4Q9NTQ9 266 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 ZDHHC7Q9NXF8 308 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 DCHS1Q96JQ0 3298 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 GVINP1Q7Z2Y8 2422 aa21.64■■□□□ 1.05
SMPDL3A-202ENST00000487215 LAMP2P13473 410 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 ARF4P18085 180 aaPredicted RBP21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 CAPSQ13938 189 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 TFDP1Q14186 410 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 USP41Q3LFD5 358 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 LILRA6Q6PI73 481 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 TPH2Q8IWU9 490 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 GPR65Q8IYL9 337 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 HACE1Q8IYU2 909 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 KCNG4Q8TDN1 519 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 ASAP3Q8TDY4 903 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 RIN2Q8WYP3 895 aaPredicted RBP21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 NAP1L4Q99733 375 aaKnown RBP21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 PRKD2Q9BZL6 878 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 TRIM6Q9C030 488 aaPredicted RBP21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 FNIP2Q9P278 1114 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 R4GN57 208 aa21.63■■□□□ 1.05
SMPDL3A-202ENST00000487215 ANHXE9PGG2 379 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 SLITRK3O94933 977 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 LMNAP02545 664 aaKnown RBP21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 RPL17P18621 184 aaKnown RBP21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 AKAP5P24588 427 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 POU5F1BQ06416 359 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 HTR4Q13639 388 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 EARS2Q5JPH6 523 aaKnown RBP21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 PHLDB3Q6NSJ2 640 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 RABGGTAQ92696 567 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 SEMA4AQ9H3S1 761 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 ARHGEF3Q9NR81 526 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 ADAM28Q9UKQ2 775 aa21.62■■□□□ 1.05
SMPDL3A-202ENST00000487215 STK36Q9NRP7 1315 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 B4GALT5O43286 388 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 DCNP07585 359 aaKnown RBP21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 ARL2P36404 184 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 SCRN1Q12765 414 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 GRIK3Q13003 919 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 SPECC1Q5M775 1068 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 CDR2LQ86X02 465 aaPredicted RBP21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 SLFN12Q8IYM2 578 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 ST13P5Q8NFI4 369 aaPredicted RBP21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 TM6SF1Q9BZW5 370 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 KLK14Q9P0G3 267 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 DLGAP2Q9P1A6 1054 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 NUMBLQ9Y6R0 609 aa21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 TDRD15B5MCY1 1934 aaKnown RBP21.61■■□□□ 1.05
SMPDL3A-202ENST00000487215 DOCK8Q8NF50 2099 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 FAM205CA6NFA0 338 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 DTNBO60941 627 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 ZMYND10O75800 440 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 CDKL5O76039 1030 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 BAG4O95429 457 aaKnown RBP21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 NPTXRO95502 500 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 GLRA2P23416 452 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 CREMQ03060 361 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 SLC27A1Q6PCB7 646 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 EIF2AK1Q9BQI3 630 aaKnown RBP21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 NFKBIZQ9BYH8 718 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 SLC2A4RGQ9NR83 387 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 CACNG4Q9UBN1 327 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 SIT1Q9Y3P8 196 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 ZMYM2Q9UBW7 1377 aa21.6■■□□□ 1.05
SMPDL3A-202ENST00000487215 EPB41L2O43491 1005 aaKnown RBP21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 DGAT1O75907 488 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 LYPLA2O95372 231 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 XBP1P17861 261 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 RTP2Q5QGT7 225 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 DCLRE1AQ6PJP8 1040 aa21.59■■□□□ 1.05
SMPDL3A-202ENST00000487215 PRSS55Q6UWB4 352 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms