RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 PAEPP09466 180 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 CALB2P22676 271 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 PGM1P36871 562 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 RCN1Q15293 331 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 AOC3Q16853 763 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 BBS9Q3SYG4 887 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 MAP3K21Q5TCX8 1036 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ACCSQ96QU6 501 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 Q9H521 79 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 NDE1Q9NXR1 346 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 PIK3C2AO00443 1686 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 RGPD1P0DJD0 1748 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 GOLGA8IPA6NC78 632 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 GOLGA8JA6NMD2 632 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 BTNL10A8MVZ5 291 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 BPIFB4P59827 614 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 AP3B2Q13367 1082 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 AUHQ13825 339 aaKnown RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 C1orf146Q5VVC0 180 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 TTBK2Q6IQ55 1244 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 NME8Q8N427 588 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 FAM20AQ96MK3 541 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 TMEM237Q96Q45 408 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 RNPEPL1Q9HAU8 725 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ALG13Q9NP73 1137 aaKnown RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ETAA1Q9NY74 926 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 KIAA0391O15091 583 aaKnown RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 KRT1P04264 644 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ATP4AP20648 1035 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 CNGA1P29973 690 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 POLGP54098 1239 aaPredicted RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 UBXN2AP68543 259 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 COBLL1Q53SF7 1204 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 DUPD1Q68J44 220 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 MIGA2Q7L4E1 593 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ZBED8Q8IZ13 594 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 PARD3BQ8TEW8 1205 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ABTB1Q969K4 478 aaPredicted RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 TEKT3Q9BXF9 490 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 MRPL47Q9HD33 250 aaKnown RBP8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 IL17RBQ9NRM6 502 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 AFF2P51816 1311 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 SPECC1L-ADORA2AF8WAN1 911 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 GOLGA8SH3BPF8 625 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 GOLGA8MH3BSY2 632 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 CAPN9O14815 690 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 UBTFL6P0CB48 400 aaPredicted RBP8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 HARSP12081 509 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 HOXA13P31271 388 aaPredicted RBP8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 VAMP7P51809 220 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 AP2B1P63010 937 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 LAMB3Q13751 1172 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 CCDC125Q86Z20 511 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 TRIM42Q8IWZ5 723 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 RNF25Q96BH1 459 aaPredicted RBP8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 HAUS1Q96CS2 278 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 FAM81BQ96LP2 452 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 GANQ9H2C0 597 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 GINM1Q9NU53 330 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 RGL1Q9NZL6 768 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 ANKFY1Q9P2R3 1169 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 FOXN3O00409 490 aaPredicted RBP8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 CYP26A1O43174 497 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 TTC4O95801 387 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 ACADSP16219 412 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 PRKCIP41743 596 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 GPS1Q13098 491 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 GRAMD1BQ3KR37 738 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 FAM102BQ5T8I3 360 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 PDIK1LQ8N165 341 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 XXYLT1Q8NBI6 393 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 HIPK4Q8NE63 616 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 OLFM3Q96PB7 478 aa8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 MMTAG2Q9BU76 263 aaKnown RBP8.15□□□□□ -1.1
COL6A4P1-202ENST00000487147 IPO5O00410 1097 aaKnown RBP8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 UNC5CO95185 931 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 GSTA2P09210 222 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 SMARCA1P28370 1054 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 MAGEA4P43358 317 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 DYNLT1P63172 113 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 ICA1Q05084 483 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 PDIA2Q13087 525 aaKnown RBP8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 ZNF268Q14587 947 aaPredicted RBP8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 ASTE1Q2TB18 679 aaPredicted RBP8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 ZC2HC1CQ53FD0 456 aaPredicted RBP8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 NLRP9Q7RTR0 991 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 IRF2BP2Q7Z5L9 587 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 FBXO33Q7Z6M2 555 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 POMGNT1Q8WZA1 660 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 DTNBP1Q96EV8 351 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 TSNARE1Q96NA8 513 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 RPS6KC1Q96S38 1066 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 RMI1Q9H9A7 625 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 UVRAGQ9P2Y5 699 aa8.15□□□□□ -1.11
COL6A4P1-202ENST00000487147 FLT1P17948 1338 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms