RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ARL2P36404 184 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 NAMPTP43490 491 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 INTS8Q75QN2 995 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 XXYLT1Q8NBI6 393 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 LSM14BQ9BX40 385 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 ARHGAP28Q9P2N2 729 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 PLAGL2Q9UPG8 496 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 CSF2RAP15509 400 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 PPIGQ13427 754 aaKnown RBP eCLIP15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 MTF1Q14872 753 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 SHHQ15465 462 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 WDR59Q6PJI9 974 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 GBP6Q6ZN66 633 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 REXO1L1PQ8IX06 675 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 TCP11Q8WWU5 503 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 JPH2Q9BR39 696 aaPredicted RBP15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 PLCB1Q9NQ66 1216 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 HSPBP1Q9NZL4 362 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 ZNF215Q9UL58 517 aaPredicted RBP15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 ADGRG1Q9Y653 693 aa15.89■□□□□ 0.13
POLR2J3-204ENST00000486319 SCN10AQ9Y5Y9 1956 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 EPHB6O15197 1021 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 TERF1P54274 439 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 EPHB4P54760 987 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 CCL23P55773 120 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 BFSP1Q12934 665 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 EXOC3L4Q17RC7 722 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 CCDC170Q8IYT3 715 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 BAP1Q92560 729 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 TMEM143Q96AN5 459 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 PRIMPOLQ96LW4 560 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 CHP1Q99653 195 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 KIFC3Q9BVG8 833 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 PCIF1Q9H4Z3 704 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 ERAP1Q9NZ08 941 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 PAXBP1Q9Y5B6 917 aa15.88■□□□□ 0.13
POLR2J3-204ENST00000486319 UMODL1Q5DID0 1318 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 KAT6AQ92794 2004 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 HBP1O60381 514 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 GLRA2P23416 452 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 MARK3P27448 753 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 CYLC1P35663 651 aaPredicted RBP15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 STRN3Q13033 797 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 BFSP2Q13515 415 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 PLCB4Q15147 1175 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 LRIT3Q3SXY7 679 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 C9orf50Q5SZB4 431 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 IER5Q5VY09 327 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 PDXDC1Q6P996 788 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 RRAGAQ7L523 313 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 TRIM50Q86XT4 487 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 DEPTORQ8TB45 409 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 SYN2Q92777 582 aaPredicted RBP15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 CBWD1Q9BRT8 395 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 CRACR2AQ9BSW2 395 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 DESI2Q9BSY9 194 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 EVPLQ92817 2033 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 ADGRA3Q8IWK6 1321 aa15.87■□□□□ 0.13
POLR2J3-204ENST00000486319 NOL4O94818 638 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 NDUFA10O95299 355 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 GARTP22102 1010 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 FMO5P49326 533 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 HSP90AA2PQ14568 343 aaPredicted RBP15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 ASAP3Q8TDY4 903 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 WNT8AQ9H1J5 351 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 GANQ9H2C0 597 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 FBXL5Q9UKA1 691 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 DAAM1Q9Y4D1 1078 aa15.86■□□□□ 0.13
POLR2J3-204ENST00000486319 IGKV6-21A0A0C4DH24 114 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 C17orf102A2RUQ5 167 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 LRRC53A6NM62 1247 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 TISP43B9A030 160 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 ANKRD63C9JTQ0 380 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 HNRNPDLO14979 420 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 KIAA0391O15091 583 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 N4BP1O75113 896 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 IPO7O95373 1038 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 SMIM10L2AP0DMW4 78 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 SMIM10L2BP0DMW5 78 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 ACRP10323 421 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 PON1P27169 355 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 VAMP7P51809 220 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 MCCD1P59942 119 aaPredicted RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 POLR2FP61218 127 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 KRT83P78385 493 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 ZNF200P98182 395 aaPredicted RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 MXD4Q14582 209 aaPredicted RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 RDH13Q8NBN7 331 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 KIF18AQ8NI77 898 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 BICD1Q96G01 975 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 SCLYQ96I15 445 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 RNPEPQ9H4A4 650 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 TMEM134Q9H6X4 195 aa15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 NHEJ1Q9H9Q4 299 aaPredicted RBP15.85■□□□□ 0.13
POLR2J3-204ENST00000486319 NLRC4Q9NPP4 1024 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms