RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CCZ1BP86790 482 aa15.7■□□□□ 0.1
COL9A1-207ENST00000486080 CCZ1P86791 482 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-207ENST00000486080 PPP3CAQ08209 521 aa15.7■□□□□ 0.1
COL9A1-207ENST00000486080 TMEM132AQ24JP5 1023 aa15.7■□□□□ 0.1
COL9A1-207ENST00000486080 SRGAP1Q7Z6B7 1085 aa15.7■□□□□ 0.1
COL9A1-207ENST00000486080 WNT8BQ93098 351 aa15.7■□□□□ 0.1
COL9A1-207ENST00000486080 POP1Q99575 1024 aaKnown RBP15.7■□□□□ 0.1
COL9A1-207ENST00000486080 ZNF233A6NK53 670 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 FAM189A1O60320 539 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 TRIM21P19474 475 aaKnown RBP15.69■□□□□ 0.1
COL9A1-207ENST00000486080 SLC9A1P19634 815 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 WNT7BP56706 349 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 MCCD1P59942 119 aaPredicted RBP15.69■□□□□ 0.1
COL9A1-207ENST00000486080 MCL1Q07820 350 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 MTFR1Q15390 333 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 MPZL3Q6UWV2 235 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 LSM14BQ9BX40 385 aaKnown RBP15.69■□□□□ 0.1
COL9A1-207ENST00000486080 GCOM2Q9BZD3 368 aaPredicted RBP15.69■□□□□ 0.1
COL9A1-207ENST00000486080 TOPORSQ9NS56 1045 aaPredicted RBP15.69■□□□□ 0.1
COL9A1-207ENST00000486080 AGPAT5Q9NUQ2 364 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 PYCARDQ9ULZ3 195 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 ZKSCAN5Q9Y2L8 839 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 CNTNAP2Q9UHC6 1331 aa15.69■□□□□ 0.1
COL9A1-207ENST00000486080 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
COL9A1-207ENST00000486080 KIAA0391O15091 583 aaKnown RBP15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TSPAN1O60635 241 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 NOL4O94818 638 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 ACTN1P12814 892 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 ARF4P18085 180 aaPredicted RBP15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TNFSF9P41273 254 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 GCLMP48507 274 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 CDC42EP1Q00587 391 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 ITGA7Q13683 1181 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TRIM14Q14142 442 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 NOLC1Q14978 699 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL9A1-207ENST00000486080 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 SLC9C1Q4G0N8 1177 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 DPY19L2P1Q6NXN4 242 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TAF2Q6P1X5 1199 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 SESTD1Q86VW0 696 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TMEM40Q8WWA1 233 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 FAM84AQ96KN4 292 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 PDZD7Q9H5P4 517 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 KIAA1586Q9HCI6 787 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 CAPN11Q9UMQ6 739 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 CABYRO75952 493 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TPM1P09493 284 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 SKILP12757 684 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 DARSP14868 501 aaKnown RBP15.68■□□□□ 0.1
COL9A1-207ENST00000486080 PON1P27169 355 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 KRT9P35527 623 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 EXOC3L4Q17RC7 722 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 GBP6Q6ZN66 633 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 SERINC5Q86VE9 423 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 CNGA4Q8IV77 575 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 NME8Q8N427 588 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 TMC2Q8TDI7 906 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 PRIMPOLQ96LW4 560 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 NUP58Q9BVL2 599 aa15.68■□□□□ 0.1
COL9A1-207ENST00000486080 ANK1P16157 1881 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 MOXD2PA6NHM9 499 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 OGTO15294 1046 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 ERLIN2O94905 339 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 LDHAP00338 332 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 HSPA1AP0DMV8 641 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 HSPA1BP0DMV9 641 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 DLATP10515 647 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 MYL7Q01449 175 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 SNX17Q15036 470 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 PTGISQ16647 500 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 FIGNQ5HY92 759 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 ZSCAN30Q86W11 494 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 TMEM139Q8IV31 216 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 CEP120Q8N960 986 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 TSEN34Q9BSV6 310 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 CDT1Q9H211 546 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 TMX1Q9H3N1 280 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 PDE11AQ9HCR9 933 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 PAK6Q9NQU5 681 aaPredicted RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 TRMT13Q9NUP7 481 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 RBAKQ9NYW8 714 aaPredicted RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 GCNT4Q9P109 453 aa15.67■□□□□ 0.1
COL9A1-207ENST00000486080 LUC7L2Q9Y383 392 aaKnown RBP15.67■□□□□ 0.1
COL9A1-207ENST00000486080 A0A1W2PQ45 241 aaPredicted RBP15.66■□□□□ 0.1
COL9A1-207ENST00000486080 A0A1W2PQY0 241 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 GTPBP10A4D1E9 387 aaKnown RBP15.66■□□□□ 0.1
COL9A1-207ENST00000486080 CCL5P13501 91 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 KCNA4P22459 653 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 EIF4BP23588 611 aaKnown RBP15.66■□□□□ 0.1
COL9A1-207ENST00000486080 OSTNP61366 133 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 PSMD6Q15008 389 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 LMBRD2Q68DH5 695 aaPredicted RBP15.66■□□□□ 0.1
COL9A1-207ENST00000486080 CATSPER4Q7RTX7 472 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 THNSL1Q8IYQ7 743 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 ARRDC4Q8NCT1 418 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 GLT1D1Q96MS3 346 aa15.66■□□□□ 0.1
COL9A1-207ENST00000486080 DEFB118Q96PH6 123 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms