RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 MSLNLQ96KJ4 702 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 DRC1Q96MC2 740 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 TRIM6Q9C030 488 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 CCSER1Q9C0I3 900 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 ZBP1Q9H171 429 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 TLE6Q9H808 572 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 CD320Q9NPF0 282 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 UBN1Q9NPG3 1134 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 MARCH5Q9NX47 278 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 CACNG4Q9UBN1 327 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 PUF60Q9UHX1 559 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 GIT1Q9Y2X7 761 aa18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 SRPRBQ9Y5M8 271 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-214ENST00000486060 PHLPP2Q6ZVD8 1323 aa18.33■□□□□ 0.53
CCHCR1-214ENST00000486060 NRP1O14786 923 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 SLC16A4O15374 487 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 NCK2O43639 380 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 EFEMP2O95967 443 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 EFNA5P52803 228 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 KRT17Q04695 432 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 PKP1Q13835 747 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 PDE12Q6L8Q7 609 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 VPS52Q8N1B4 723 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 RAD54LQ92698 747 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 CALML4Q96GE6 196 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 TMEM169Q96HH4 297 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 TMEM175Q9BSA9 504 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 NTPCRQ9BSD7 190 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 TMEM134Q9H6X4 195 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 PTPRHQ9HD43 1115 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 KMT5AQ9NQR1 393 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 ENTPD7Q9NQZ7 604 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 SNTG2Q9NY99 539 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 KANSL3Q9P2N6 904 aa18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 BARX2Q9UMQ3 279 aaPredicted RBP18.33■□□□□ 0.52
CCHCR1-214ENST00000486060 C2orf71A6NGG8 1288 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 K7ERI5 159 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 ABLIM1O14639 778 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 PTGESO14684 152 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 DMP1Q13316 513 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 DHX8Q14562 1220 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 SLC39A14Q15043 492 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 ATF7IP2Q5U623 682 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 DDX53Q86TM3 631 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 MRPL43Q8N983 215 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 TMEM161BQ8NDZ6 487 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 ACO2Q99798 780 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 REEP2Q9BRK0 252 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 TIPINQ9BVW5 301 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 C17orf75Q9HAS0 396 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 PARP2Q9UGN5 583 aa18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 MORC2Q9Y6X9 1032 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-214ENST00000486060 ZMYM2Q9UBW7 1377 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 A0A087X0B3 334 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 MBTPS2O43462 519 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 RECQL4O94761 1208 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 ALDH2P05091 517 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 PLS3P13797 630 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 NASPP49321 788 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 NAB2Q15742 525 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 GPBP1Q86WP2 473 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 CEP120Q8N960 986 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 SPIRE2Q8WWL2 714 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 RABGGTAQ92696 567 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 FAM193BQ96PV7 902 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 PAAF1Q9BRP4 392 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 TARS2Q9BW92 718 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 CDT1Q9H211 546 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 NGRNQ9NPE2 291 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 KCND2Q9NZV8 630 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 TFIP11Q9UBB9 837 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 TNFSF13BQ9Y275 285 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 FAN1Q9Y2M0 1017 aa18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 PRG3Q9Y2Y8 225 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-214ENST00000486060 DOCK6Q96HP0 2047 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 TNFRSF10AO00220 468 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 CTSAP10619 480 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 MAPTP10636 758 aaKnown RBP18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 PROZP22891 400 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 NDUFV1P49821 464 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 GIT2Q14161 759 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 TMEM132AQ24JP5 1023 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 TAS1R1Q7RTX1 841 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 FAM178BQ8IXR5 827 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 RNF168Q8IYW5 571 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 LINC00301Q8NCQ3 95 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 KHSRPQ92945 711 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 PPP2R3CQ969Q6 453 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 ZBTB45Q96K62 511 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 FIZ1Q96SL8 496 aa18.3■□□□□ 0.52
CCHCR1-214ENST00000486060 DENND4AQ7Z401 1863 aa18.29■□□□□ 0.52
CCHCR1-214ENST00000486060 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-214ENST00000486060 LILRB3O75022 631 aa18.29■□□□□ 0.52
CCHCR1-214ENST00000486060 CLASP2O75122 1294 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms