RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, human

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-213	ENST00000485962	PPP2R5E	Q16537	467 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	YTHDF3	Q7Z739	585 aa	Known RBP	13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	RAPGEF5	Q92565	580 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	RASAL2	Q9UJF2	1139 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	SCN9A	Q15858	1988 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	FTL	P02792	175 aa	Predicted RBP	13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	DLG4	P78352	724 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	QPCT	Q16769	361 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	TSNAXIP1	Q2TAA8	658 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	ZNF394	Q53GI3	561 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	CPLX4	Q7Z7G2	160 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	HOOK3	Q86VS8	718 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	JAML	Q86YT9	394 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	RHOT2	Q8IXI1	618 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	ACER1	Q8TDN7	264 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	MASTL	Q96GX5	879 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	SYT11	Q9BT88	431 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	TEKT3	Q9BXF9	490 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	WDR11	Q9BZH6	1224 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	EHMT1	Q9H9B1	1298 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	DMAC2	Q9NW81	257 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	MKS1	Q9NXB0	559 aa		13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	DDX20	Q9UHI6	824 aa	Known RBP	13.26	□□□□□ -0.29
SGSM3-213	ENST00000485962	SRRM3	A6NNA2	597 aa	Predicted RBP	13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	TISP43	B9A030	160 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	MYCLP1	P12525	358 aa	Predicted RBP	13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	GCLM	P48507	274 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	ZNF131	P52739	623 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	EIF3B	P55884	814 aa	Known RBP	13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	MESD	Q14696	234 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	KIAA1755	Q5JYT7	1200 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	UBL4B	Q8N7F7	174 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	MDM1	Q8TC05	714 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	C18orf8	Q96DM3	657 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	DHRS1	Q96LJ7	313 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	SHBG	P04278	402 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	FNTA	P49354	379 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	PMS2	P54278	862 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	DENND2C	Q68D51	928 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	KRT35	Q92764	455 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	SELENOS	Q9BQE4	189 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	RGS17	Q9UGC6	210 aa	Predicted RBP	13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	SYNGAP1	Q96PV0	1343 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	SLX4	Q8IY92	1834 aa		13.25	□□□□□ -0.29
SGSM3-213	ENST00000485962	ATP2C2	O75185	946 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	MARCKSL1	P49006	195 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	MAPK7	Q13164	816 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	KIF22	Q14807	665 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	DUPD1	Q68J44	220 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	ARHGEF19	Q8IW93	802 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	FBXO25	Q8TCJ0	367 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	MRI	Q9BWK5	157 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	KCND2	Q9NZV8	630 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	SERPINA10	Q9UK55	444 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	ZBTB21	Q9ULJ3	1066 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	FAM187A	A6NFU0	413 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	PHF20L1	A8MW92	1017 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	TCP10L2	B9ZVM9	353 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	ATMIN	O43313	823 aa	Predicted RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	PECAM1	P16284	738 aa	Predicted RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	DHX34	Q14147	1143 aa	Known RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	SEL1L2	Q5TEA6	688 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	ZNF772	Q68DY9	489 aa	Predicted RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	PADI6	Q6TGC4	694 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	RBM12B	Q8IXT5	1001 aa	Known RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	CCDC13	Q8IYE1	715 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	CACNA2D3	Q8IZS8	1091 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	NLGN1	Q8N2Q7	840 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	PRMT6	Q96LA8	375 aa	Predicted RBP	13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	AGAP3	Q96P47	875 aa		13.24	□□□□□ -0.29
SGSM3-213	ENST00000485962	SH3BP5	O60239	455 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	MMP10	P09238	476 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	VCAM1	P19320	739 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	RFX1	P22670	979 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	RAB27A	P51159	221 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	VAMP7	P51809	220 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	DBN1	Q16643	649 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	INTS8	Q75QN2	995 aa	Known RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	SEC16B	Q96JE7	1060 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	CCDC114	Q96M63	670 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	SH2D3A	Q9BRG2	576 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	VCPKMT	Q9H867	229 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	LARS	Q9P2J5	1176 aa	Known RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	MRPL11	Q9Y3B7	192 aa	Known RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	CTNND1	O60716	968 aa	Known RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	PHF2	O75151	1096 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	IBSP	P21815	317 aa	Predicted RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	GPC5	P78333	572 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	ACTN3	Q08043	901 aa	Predicted RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	PPP3CA	Q08209	521 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	2e-7	■■■□□ 19.1
SGSM3-213	ENST00000485962	CLUL1	Q15846	466 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	CBWD1	Q9BRT8	395 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	ZDHHC18	Q9NUE0	388 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	UBAP1	Q9NZ09	502 aa		13.23	□□□□□ -0.29
SGSM3-213	ENST00000485962	TPX2	Q9ULW0	747 aa	Known RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 100 ms