RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 TMEM175Q9BSA9 504 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
PTCD1-205ENST00000485746 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
PTCD1-205ENST00000485746 DNAJB4Q9UDY4 337 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 ARID2Q68CP9 1835 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 CUTAO60888 179 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 DDHD2O94830 711 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 CXCL14O95715 111 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 HARSP12081 509 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ME1P48163 572 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 NDUFV1P49821 464 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 AFF1P51825 1210 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ERVFC1P60507 584 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 CAMK1Q14012 370 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 GIT2Q14161 759 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 EEF1DP3Q658K8 133 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 DYMQ7RTS9 669 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ADGRD2Q7Z7M1 963 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 VPS52Q8N1B4 723 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 PDILTQ8N807 584 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 KCNG4Q8TDN1 519 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 IGSF21Q96ID5 467 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ZFP42Q96MM3 310 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 NTPCRQ9BSD7 190 aaKnown RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 CCDC94Q9BW85 323 aaPredicted RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 PARVGQ9HBI0 331 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 PRG3Q9Y2Y8 225 aaPredicted RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 PCDHGC5Q9Y5F6 944 aa13.74□□□□□ -0.21
PTCD1-205ENST00000485746 MORC2Q9Y6X9 1032 aaPredicted RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 COL4A4P53420 1690 aaPredicted RBP13.74□□□□□ -0.21
PTCD1-205ENST00000485746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
PTCD1-205ENST00000485746 K7ENM7 598 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 NRP1O14786 923 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 PER2O15055 1255 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 TRAK2O60296 914 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 RECQL4O94761 1208 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 EDN1P05305 212 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 KCNQ1P51787 676 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 OSTNP61366 133 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 DNM1Q05193 864 aaKnown RBP13.73□□□□□ -0.21
PTCD1-205ENST00000485746 PKP1Q13835 747 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 HAUS6Q7Z4H7 955 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
PTCD1-205ENST00000485746 FAM178BQ8IXR5 827 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 TMEM161BQ8NDZ6 487 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 LRRC15Q8TF66 581 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
PTCD1-205ENST00000485746 H3BQ06 376 aaPredicted RBP13.72□□□□□ -0.21
PTCD1-205ENST00000485746 THP07101 528 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 SRGAP2BP0DMP2 458 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
PTCD1-205ENST00000485746 GTF2F1P35269 517 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTCD1-205ENST00000485746 LIG4P49917 911 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 GRIK3Q13003 919 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 TAS1R3Q7RTX0 852 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 DDX12PQ92771 950 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 CDCA3Q99618 268 aaPredicted RBP13.72□□□□□ -0.21
PTCD1-205ENST00000485746 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 ANKFY1Q9P2R3 1169 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 STK39Q9UEW8 545 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
PTCD1-205ENST00000485746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.71□□□□□ -0.21
PTCD1-205ENST00000485746 FSD2A1L4K1 749 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 FSCN2O14926 492 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 CLDN3O15551 220 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 TADA2AO75478 443 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 MCF2P10911 925 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 IDEP14735 1019 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 SCP2P22307 547 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 ABCD1P33897 745 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 NCKAP1LP55160 1127 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 AMPD3Q01432 767 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 ADAM15Q13444 863 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 CLUL1Q15846 466 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 PUS10Q3MIT2 529 aaKnown RBP13.71□□□□□ -0.21
PTCD1-205ENST00000485746 LEXMQ3ZCV2 418 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 EFHBQ8N7U6 833 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 ADAMTS19Q8TE59 1207 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 DHX58Q96C10 678 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 ZBTB45Q96K62 511 aaPredicted RBP13.71□□□□□ -0.21
PTCD1-205ENST00000485746 ACAP3Q96P50 834 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms