RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 HOXD13P35453 343 aa13.02□□□□□ -0.32
APTX-227ENST00000485479 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.32
APTX-227ENST00000485479 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.32
APTX-227ENST00000485479 RC3H2Q9HBD1 1191 aaKnown RBP13.02□□□□□ -0.32
APTX-227ENST00000485479 TMEM161AQ9NX61 479 aa13.02□□□□□ -0.32
APTX-227ENST00000485479 PARP2Q9UGN5 583 aa13.02□□□□□ -0.32
APTX-227ENST00000485479 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.32
APTX-227ENST00000485479 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.33
APTX-227ENST00000485479 TRIP11Q15643 1979 aa13.02□□□□□ -0.33
APTX-227ENST00000485479 KIAA1671Q9BY89 1806 aa13.02□□□□□ -0.33
APTX-227ENST00000485479 B4GALT3O60512 393 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 AXLP30530 894 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 TNFSF9P41273 254 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 FAM189BP81408 668 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 CNNM4Q6P4Q7 775 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 GAD1Q99259 594 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 RAD9AQ99638 391 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 ADPGKQ9BRR6 497 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 GBP3Q9H0R5 595 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 TRANK1O15050 2925 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 RFXAPO00287 272 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 N4BP3O15049 544 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 POMCP01189 267 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 STAG3L1P0CL83 205 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 HTRA4P83105 476 aaPredicted RBP13.01□□□□□ -0.33
APTX-227ENST00000485479 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
APTX-227ENST00000485479 MPZL3Q6UWV2 235 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 LRRC55Q6ZSA7 311 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
APTX-227ENST00000485479 CASD1Q96PB1 797 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 TTYH1Q9H313 450 aaPredicted RBP13.01□□□□□ -0.33
APTX-227ENST00000485479 PCIF1Q9H4Z3 704 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 INSL6Q9Y581 213 aa13.01□□□□□ -0.33
APTX-227ENST00000485479 MRPL42Q9Y6G3 142 aaKnown RBP13.01□□□□□ -0.33
APTX-227ENST00000485479 PVALEFA0A1B0GWK0 134 aa13□□□□□ -0.33
APTX-227ENST00000485479 EPOPA6NHQ4 379 aa13□□□□□ -0.33
APTX-227ENST00000485479 CLDN3O15551 220 aa13□□□□□ -0.33
APTX-227ENST00000485479 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
APTX-227ENST00000485479 TOM1L1O75674 476 aa13□□□□□ -0.33
APTX-227ENST00000485479 RECQL4O94761 1208 aa13□□□□□ -0.33
APTX-227ENST00000485479 ITGA4P13612 1032 aa13□□□□□ -0.33
APTX-227ENST00000485479 PROZP22891 400 aa13□□□□□ -0.33
APTX-227ENST00000485479 ADSSP30520 456 aa13□□□□□ -0.33
APTX-227ENST00000485479 SCNN1GP51170 649 aa13□□□□□ -0.33
APTX-227ENST00000485479 SMAD3P84022 425 aaKnown RBP13□□□□□ -0.33
APTX-227ENST00000485479 SPAG1Q07617 926 aa13□□□□□ -0.33
APTX-227ENST00000485479 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
APTX-227ENST00000485479 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
APTX-227ENST00000485479 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
APTX-227ENST00000485479 ABI1Q8IZP0 508 aa13□□□□□ -0.33
APTX-227ENST00000485479 SAAL1Q96ER3 474 aa13□□□□□ -0.33
APTX-227ENST00000485479 FAM84AQ96KN4 292 aa13□□□□□ -0.33
APTX-227ENST00000485479 CBWD1Q9BRT8 395 aa13□□□□□ -0.33
APTX-227ENST00000485479 RSAD1Q9HA92 442 aa13□□□□□ -0.33
APTX-227ENST00000485479 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
APTX-227ENST00000485479 MIOSQ9NXC5 875 aa13□□□□□ -0.33
APTX-227ENST00000485479 MSRAQ9UJ68 235 aa13□□□□□ -0.33
APTX-227ENST00000485479 PCDHA11Q9Y5I1 949 aa13□□□□□ -0.33
APTX-227ENST00000485479 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
APTX-227ENST00000485479 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
APTX-227ENST00000485479 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
APTX-227ENST00000485479 CLIC2O15247 247 aa13□□□□□ -0.33
APTX-227ENST00000485479 ACOT2P49753 483 aa13□□□□□ -0.33
APTX-227ENST00000485479 RAB27AP51159 221 aa13□□□□□ -0.33
APTX-227ENST00000485479 TAP1Q03518 808 aa13□□□□□ -0.33
APTX-227ENST00000485479 EPM2AIP1Q7L775 607 aaPredicted RBP13□□□□□ -0.33
APTX-227ENST00000485479 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
APTX-227ENST00000485479 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
APTX-227ENST00000485479 ACCSQ96QU6 501 aa13□□□□□ -0.33
APTX-227ENST00000485479 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
APTX-227ENST00000485479 ST6GALNAC4Q9H4F1 302 aa13□□□□□ -0.33
APTX-227ENST00000485479 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
APTX-227ENST00000485479 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 NT5C1B-RDH14C9J2C7 533 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 F8W810 466 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 H0YCG3 227 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 ZNF623O75123 536 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 OFD1O75665 1012 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 LINC00271P0C7V0 271 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 CXCL8P10145 99 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
APTX-227ENST00000485479 ZNF280BQ86YH2 543 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 POMGNT1Q8WZA1 660 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 SMARCE1Q969G3 411 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 TIGD1Q96MW7 591 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms