RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 CAMK1Q14012 370 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 LEXMQ3ZCV2 418 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 TWF2Q6IBS0 349 aaKnown RBP11.79□□□□□ -0.52
DDX56-212ENST00000485367 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 IQUBQ8NA54 791 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 COLGALT1Q8NBJ5 622 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 NEK9Q8TD19 979 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 POF1BQ8WVV4 589 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 TCP11Q8WWU5 503 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 PABPC5Q96DU9 382 aaKnown RBP11.79□□□□□ -0.52
DDX56-212ENST00000485367 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 CLDND1Q9NY35 253 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 PCDHA7Q9UN72 937 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 PIN4Q9Y237 131 aaKnown RBP11.79□□□□□ -0.52
DDX56-212ENST00000485367 PLXNA4Q9HCM2 1894 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 POTEMA6NI47 508 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 ARHGAP6O43182 974 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 LYPLA2O95372 231 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 EOMESO95936 686 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 HYAL1Q12794 435 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 CLLU1OSQ5K130 101 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 CC2D1AQ6P1N0 951 aaPredicted RBP11.78□□□□□ -0.52
DDX56-212ENST00000485367 LRRC55Q6ZSA7 311 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 BRAPQ7Z569 592 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 ZNF598Q86UK7 904 aaKnown RBP11.78□□□□□ -0.52
DDX56-212ENST00000485367 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 HELQQ8TDG4 1101 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 RABGGTAQ92696 567 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 MTRQ99707 1265 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 CWH43Q9H720 699 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 IFT122Q9HBG6 1241 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 ANKEF1Q9NU02 776 aa11.78□□□□□ -0.52
DDX56-212ENST00000485367 NCK2O43639 380 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.52
DDX56-212ENST00000485367 FGF18O76093 207 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 LAG3P18627 525 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 IRS1P35568 1242 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 TECP42680 631 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 PHKA2P46019 1235 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 FANCCQ00597 558 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 CEBPZQ03701 1054 aaKnown RBP11.77□□□□□ -0.52
DDX56-212ENST00000485367 NCAPHQ15003 741 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 DPCR1Q3MIW9 517 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 LONRF3Q496Y0 759 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.52
DDX56-212ENST00000485367 LRRC43Q8N309 656 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.77□□□□□ -0.52
DDX56-212ENST00000485367 MICAL1Q8TDZ2 1067 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 PIGOQ8TEQ8 1089 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 ARFGAP3Q9NP61 516 aa11.77□□□□□ -0.52
DDX56-212ENST00000485367 ASAP2O43150 1006 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 OR52Z1P0C646 297 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 ATF7P17544 494 aaPredicted RBP11.77□□□□□ -0.53
DDX56-212ENST00000485367 SMC1AQ14683 1233 aaKnown RBP11.77□□□□□ -0.53
DDX56-212ENST00000485367 COL19A1Q14993 1142 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 SRGAP1Q7Z6B7 1085 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 REXO1L1PQ8IX06 675 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 RNF149Q8NC42 400 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 LPPQ93052 612 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 PPP2R3CQ969Q6 453 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 MINDY3Q9H8M7 445 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 XPNPEP1Q9NQW7 623 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 PCDHGC5Q9Y5F6 944 aa11.77□□□□□ -0.53
DDX56-212ENST00000485367 CCDC151A5D8V7 595 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 DGAT1O75907 488 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 SKIP12755 728 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 CMA1P23946 247 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 PBX3P40426 434 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 UBE3AQ05086 875 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 BRD3Q15059 726 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 STK38Q15208 465 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 SF3A1Q15459 793 aaKnown RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 CLUL1Q15846 466 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 PUS10Q3MIT2 529 aaKnown RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 KCNT2Q6UVM3 1135 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 ADGRD2Q7Z7M1 963 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 RBM23Q86U06 439 aaKnown RBP11.76□□□□□ -0.53
DDX56-212ENST00000485367 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 LRRN4CLQ8ND94 238 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 ERMNQ8TAM6 284 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 ZNF558Q96NG5 402 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 TUBB2BQ9BVA1 445 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 TRAIPQ9BWF2 469 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 AGPAT5Q9NUQ2 364 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 FAM105AQ9NUU6 356 aa11.76□□□□□ -0.53
DDX56-212ENST00000485367 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
DDX56-212ENST00000485367 LINC01565O15544 149 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms