RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 ALDH7A1P49419 539 aaKnown RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 KRT17Q04695 432 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 MAPK7Q13164 816 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 GIT2Q14161 759 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 ARSHQ5FYA8 562 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 CLLU1OSQ5K130 101 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 UBXN11Q5T124 520 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 ATF7IP2Q5U623 682 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 SPRED2Q7Z698 418 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 CDR2LQ86X02 465 aaPredicted RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 THNSL1Q8IYQ7 743 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 CEP57L1Q8IYX8 460 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 DAW1Q8N136 415 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 DDX12PQ92771 950 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 PPP2R3CQ969Q6 453 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 DHX58Q96C10 678 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 BICD1Q96G01 975 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 ZNF558Q96NG5 402 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 KIFC3Q9BVG8 833 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 APOL6Q9BWW8 343 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 EIF2AQ9BY44 585 aaKnown RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 CCDC113Q9H0I3 377 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 TNMDQ9H2S6 317 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 MAGEF1Q9HAY2 307 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 ARHGAP28Q9P2N2 729 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 SEL1LQ9UBV2 794 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 PARP2Q9UGN5 583 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 PUF60Q9UHX1 559 aaKnown RBP8.59□□□□□ -1.03
MACF1-220ENST00000485063 GIT1Q9Y2X7 761 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 ZDHHC9Q9Y397 364 aa8.59□□□□□ -1.03
MACF1-220ENST00000485063 RANBP2P49792 3224 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 MYO9BQ13459 2157 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 PLXNA4Q9HCM2 1894 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 GOLGA6L4A6NEF3 574 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 EPOPA6NHQ4 379 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 POLR2DO15514 142 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 ZC3H11AO75152 810 aaKnown RBP eCLIP8.58□□□□□ -1.04
MACF1-220ENST00000485063 OFD1O75665 1012 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 IDEP14735 1019 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 GAP43P17677 238 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 YARSP54577 528 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 NCKAP1LP55160 1127 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 UBE3AQ05086 875 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 ADGRE1Q14246 886 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 CCDC85BQ15834 202 aaPredicted RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 ZNF568Q3ZCX4 644 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 ADALQ6DHV7 355 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 SHC4Q6S5L8 630 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 AGMOQ6ZNB7 445 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 STXBP4Q6ZWJ1 553 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 HAUS6Q7Z4H7 955 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 CCDC65Q8IXS2 484 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 KLHL23Q8NBE8 558 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 COLGALT1Q8NBJ5 622 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 MRPL38Q96DV4 380 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 CCDC34Q96HJ3 373 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 CCDC94Q9BW85 323 aaPredicted RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 GBP3Q9H0R5 595 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 NXF3Q9H4D5 531 aaKnown RBP8.58□□□□□ -1.04
MACF1-220ENST00000485063 PDZD7Q9H5P4 517 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 CWH43Q9H720 699 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 RNF19AQ9NV58 838 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 HCSTQ9UBK5 93 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 PLAGL2Q9UPG8 496 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 TNFSF13BQ9Y275 285 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 HES2Q9Y543 173 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 MTCH2Q9Y6C9 303 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 ZMYM2Q9UBW7 1377 aa8.58□□□□□ -1.04
MACF1-220ENST00000485063 ARL5CA6NH57 179 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 MYMKA6NI61 221 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 MEIS3P2A8K0S8 358 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 TK2O00142 265 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 CLDN3O15551 220 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 LPXNO60711 386 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 TOM1L1O75674 476 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 FGF18O76093 207 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 POMCP01189 267 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 ALDH2P05091 517 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 MAPTP10636 758 aaKnown RBP8.57□□□□□ -1.04
MACF1-220ENST00000485063 AKAP5P24588 427 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 MLH1P40692 756 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 LIG4P49917 911 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 ZNF131P52739 623 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 BCAR1P56945 870 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 ALCAMQ13740 583 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 HERC4Q5GLZ8 1057 aaPredicted RBP8.57□□□□□ -1.04
MACF1-220ENST00000485063 AXDND1Q5T1B0 1012 aaPredicted RBP8.57□□□□□ -1.04
MACF1-220ENST00000485063 NT5DC1Q5TFE4 455 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 RESP18Q5W5W9 173 aa8.57□□□□□ -1.04
MACF1-220ENST00000485063 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
MACF1-220ENST00000485063 MPZL3Q6UWV2 235 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms