RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 VPS39Q96JC1 886 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 GCNAQ96QF7 691 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 TRIM51Q9BSJ1 452 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 SLIT1O75093 1534 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 AGTP01019 485 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 CYP2D6P10635 497 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
RXRA-203ENST00000484822 FLOT2Q14254 428 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 IZUMO3Q5VZ72 239 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 SNF8Q96H20 258 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 ZIM3Q96PE6 472 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
RXRA-203ENST00000484822 TRIM33Q9UPN9 1127 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 ARHGEF9O43307 516 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 CDC27P30260 824 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 FMR1Q06787 632 aaKnown RBP eCLIP16.04■□□□□ 0.16
RXRA-203ENST00000484822 DRAP1Q14919 205 aaPredicted RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 E9PMD0 336 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 TRPC1P48995 793 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 RASGRP2Q7LDG7 609 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 UBTFL6P0CB48 400 aaPredicted RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 CACNB3P54284 484 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 ALDH18A1P54886 795 aaKnown RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 ZBED2Q9BTP6 218 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 NEDD4P46934 1319 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 NTSR2O95665 410 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 LONRF1Q17RB8 773 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 CATSPER3Q86XQ3 398 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 AGGF1Q8N302 714 aaeCLIP16.04■□□□□ 0.16
RXRA-203ENST00000484822 PSPC1Q8WXF1 523 aaKnown RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 TRABDQ9H4I3 376 aa16.04■□□□□ 0.16
RXRA-203ENST00000484822 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
RXRA-203ENST00000484822 USP6NLQ92738 828 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 ZNF512BQ96KM6 892 aaPredicted RBP16.03■□□□□ 0.16
RXRA-203ENST00000484822 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
RXRA-203ENST00000484822 NPHS2Q9NP85 383 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 TAC1P20366 129 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 COASYQ13057 564 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 ANGPTL8Q6UXH0 198 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 MB21D2Q8IYB1 491 aaPredicted RBP16.03■□□□□ 0.16
RXRA-203ENST00000484822 TBC1D16Q8TBP0 767 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 ZBTB10Q96DT7 871 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 NOD2Q9HC29 1040 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 SKOR1P84550 965 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 DHX34Q14147 1143 aaKnown RBP16.03■□□□□ 0.16
RXRA-203ENST00000484822 PDIA6Q15084 440 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 BBS5Q8N3I7 341 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 TC2NQ8N9U0 490 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 WWP1Q9H0M0 922 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 GSG1L2A8MUP6 293 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 FAM107AO95990 144 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 PMLP29590 882 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
RXRA-203ENST00000484822 CARSP49589 748 aaKnown RBP16.03■□□□□ 0.16
RXRA-203ENST00000484822 PEX3P56589 373 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 PRAMEP78395 509 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 KRT17Q04695 432 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 AP1B1Q10567 949 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 ABCF3Q9NUQ8 709 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 RHBDL2Q9NX52 303 aa16.03■□□□□ 0.16
RXRA-203ENST00000484822 PVALEFA0A1B0GWK0 134 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 CCT8L1PA6NM43 557 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 IGF2BP3O00425 579 aaKnown RBP eCLIP16.02■□□□□ 0.16
RXRA-203ENST00000484822 DAB1O75553 588 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 FCER1AP12319 257 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 HDAC4P56524 1084 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 EFTUD2Q15029 972 aaKnown RBP eCLIP16.02■□□□□ 0.166e-8■■■■□ 25.5
RXRA-203ENST00000484822 NBPF20Q3BBV1 942 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 MTERF2Q49AM1 385 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 KIAA1755Q5JYT7 1200 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 ATP11CQ8NB49 1132 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 F5H423 210 aaPredicted RBP16.02■□□□□ 0.16
RXRA-203ENST00000484822 AP3B2Q13367 1082 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 CEP55Q53EZ4 464 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 TTC13Q8NBP0 860 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 SGSM3Q96HU1 749 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 MXD3Q9BW11 206 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 LRRC4Q9HBW1 653 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 ZNF233A6NK53 670 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 MRPS35P82673 323 aaKnown RBP16.02■□□□□ 0.16
RXRA-203ENST00000484822 BTKQ06187 659 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 NYAP1Q6ZVC0 841 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 RFFLQ8WZ73 363 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.16
RXRA-203ENST00000484822 TMED10P49755 219 aaKnown RBP16.02■□□□□ 0.15
RXRA-203ENST00000484822 SCARF1Q14162 830 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 CYB5D1Q6P9G0 228 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 MRPL40Q9NQ50 206 aaKnown RBP16.02■□□□□ 0.15
RXRA-203ENST00000484822 PCSK1NQ9UHG2 260 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 REREQ9P2R6 1566 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms