RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 CTSHP09668 335 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 ARF4P18085 180 aaPredicted RBP22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 FGFR4P22455 802 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 NCBP1Q09161 790 aaKnown RBP22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 TCERG1LQ5VWI1 586 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 ZBTB33Q86T24 672 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 DHX38Q92620 1227 aaKnown RBP22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 SLC35C1Q96A29 364 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 FAM213AQ9BRX8 229 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 CAND2O75155 1236 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 HARSP12081 509 aaKnown RBP22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 CDK7P50613 346 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 MGAT3Q09327 533 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 SPC24Q8NBT2 197 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 CPB2Q96IY4 423 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 SENP6Q9GZR1 1112 aaPredicted RBP22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 TRPV6Q9H1D0 765 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 PDZD7Q9H5P4 517 aa22.28■■□□□ 1.16
VCPKMT-203ENST00000484763 ZNF233A6NK53 670 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 PBX1P40424 430 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 GJA8P48165 433 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 KCNH2Q12809 1159 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 TRIM71Q2Q1W2 868 aaKnown RBP22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 EEF1DP3Q658K8 133 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 TMC6Q7Z403 805 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 PRDM10Q9NQV6 1147 aa22.27■■□□□ 1.16
VCPKMT-203ENST00000484763 A0A1B0GUA9 196 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 A0A1W2PQC6 194 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 OGTO15294 1046 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 AFPP02771 609 aaKnown RBP22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 AXLP30530 894 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 MNX1P50219 401 aaPredicted RBP22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 CYP24A1Q07973 514 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 PTPN21Q16825 1174 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 USP37Q86T82 979 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 CDR2LQ86X02 465 aaPredicted RBP22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 MFSD14AQ96MC6 490 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 CDT1Q9H211 546 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 AGPAT5Q9NUQ2 364 aa22.27■■□□□ 1.15
VCPKMT-203ENST00000484763 FAM189A1O60320 539 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 CHRNA1P02708 482 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 MCF2P10911 925 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 ACOT2P49753 483 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 VAMP7P51809 220 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 ENPEPQ07075 957 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 SPECC1LQ69YQ0 1117 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 ANKLE1Q8NAG6 615 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 ADPGKQ9BRR6 497 aa22.26■■□□□ 1.15
VCPKMT-203ENST00000484763 MROH7Q68CQ1 1323 aa22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 ITIH6Q6UXX5 1313 aa22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 GOLGA6L6A8MZA4 724 aa22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 MCCD1P59942 119 aaPredicted RBP22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 NOTUMQ6P988 496 aa22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 CRELD2Q6UXH1 353 aaPredicted RBP22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 APBB1IPQ7Z5R6 666 aaPredicted RBP22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 FAM126BQ8IXS8 530 aa22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 ERGIC2Q96RQ1 377 aa22.25■■□□□ 1.15
VCPKMT-203ENST00000484763 TRIM49P0CI25 452 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 TRIM49CP0CI26 452 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 HOXA11P31270 313 aaPredicted RBP22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 FAM26DQ5JW98 314 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 ZBTB41Q5SVQ8 909 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 FAM228AQ86W67 206 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 TMC2Q8TDI7 906 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 RBAKQ9NYW8 714 aaPredicted RBP22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 IMPACTQ9P2X3 320 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 RPS6KA5O75582 802 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 DCAF4L1Q3SXM0 396 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 SLC27A1Q6PCB7 646 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 PARD3BQ8TEW8 1205 aa22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 PIN4Q9Y237 131 aaKnown RBP22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 NOC2LQ9Y3T9 749 aaKnown RBP22.24■■□□□ 1.15
VCPKMT-203ENST00000484763 PTMAP06454 111 aaKnown RBP22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 CAPN2P17655 700 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 DLG4P78352 724 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 BRSK2Q8IWQ3 736 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 THNSL1Q8IYQ7 743 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 CCDC155Q8N6L0 562 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 CAGE1Q8TC20 777 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 PLEKHO2Q8TD55 490 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 CCDC127Q96BQ5 260 aa22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 CPSF3Q9UKF6 684 aaKnown RBP22.23■■□□□ 1.15
VCPKMT-203ENST00000484763 STX10O60499 249 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 COL6A1P12109 1028 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 CKBP12277 381 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 TNFSF9P41273 254 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 FMO5P49326 533 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 PSMD6Q15008 389 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 SYCP1Q15431 976 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 KYAT1Q16773 422 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 SEZ6Q53EL9 994 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 ZNF618Q5T7W0 954 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 SLC39A5Q6ZMH5 540 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 TMEM106CQ9BVX2 250 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 TLR3O15455 904 aaKnown RBP22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 CD4P01730 458 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 RBL2Q08999 1139 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 FBXO47Q5MNV8 452 aa22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 DIS3LQ8TF46 1054 aaKnown RBP22.22■■□□□ 1.15
VCPKMT-203ENST00000484763 CCDC51Q96ER9 411 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms