RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TMEM175Q9BSA9 504 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 VN1R3Q9BXE9 311 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 ZBP1Q9H171 429 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 KLK14Q9P0G3 267 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 BARX2Q9UMQ3 279 aaPredicted RBP14.22□□□□□ -0.13
HDAC1-209ENST00000484305 FAN1Q9Y2M0 1017 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 NPHP3-ACAD11A0A0J9YXS1 232 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CARNS1A5YM72 827 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 C2orf71A6NGG8 1288 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 K7ERI5 159 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 SLC26A4O43511 780 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CXCL14O95715 111 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 GUCY2CP25092 1073 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 MARCKSP29966 332 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CEBPZQ03701 1054 aaKnown RBP14.21□□□□□ -0.13
HDAC1-209ENST00000484305 DSC1Q08554 894 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 DMP1Q13316 513 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-209ENST00000484305 KCNC3Q14003 757 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 SMC1AQ14683 1233 aaKnown RBP14.21□□□□□ -0.13
HDAC1-209ENST00000484305 KARSQ15046 597 aaKnown RBP14.21□□□□□ -0.13
HDAC1-209ENST00000484305 ARSHQ5FYA8 562 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 SPECC1Q5M775 1068 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 TAS1R3Q7RTX0 852 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CALML4Q96GE6 196 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CDCA3Q99618 268 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-209ENST00000484305 TIPINQ9BVW5 301 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CD320Q9NPF0 282 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 KMT5AQ9NQR1 393 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 SNTG2Q9NY99 539 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 ARHGAP28Q9P2N2 729 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 CD207Q9UJ71 328 aa14.21□□□□□ -0.13
HDAC1-209ENST00000484305 SLC16A4O15374 487 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 MBTPS2O43462 519 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 CA8P35219 290 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 OR1G1P47890 313 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 COASYQ13057 564 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 ATF7IP2Q5U623 682 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 LLGL2Q6P1M3 1020 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 ADPGKQ9BRR6 497 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 NTPCRQ9BSD7 190 aaKnown RBP14.2□□□□□ -0.14
HDAC1-209ENST00000484305 CXCL16Q9H2A7 254 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 TMEM134Q9H6X4 195 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 C17orf75Q9HAS0 396 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 FBXO2Q9UK22 296 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-209ENST00000484305 RBM19Q9Y4C8 960 aaKnown RBP14.2□□□□□ -0.14
HDAC1-209ENST00000484305 C5orf42Q9H799 3197 aa14.2□□□□□ -0.14
HDAC1-209ENST00000484305 PHLPP2Q6ZVD8 1323 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 F8W810 466 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 CLASP2O75122 1294 aaKnown RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 CTSAP10619 480 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 PLS3P13797 630 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 PLCG1P19174 1290 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 SMAD4Q13485 552 aaKnown RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 MCM6Q14566 821 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 SMAD2Q15796 467 aaKnown RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 TMEM184AQ6ZMB5 413 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 GPBP1Q86WP2 473 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 SMRP1Q8NCR6 262 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 EPSTI1Q96J88 318 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 CLIC6Q96NY7 704 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 USP28Q96RU2 1077 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 RPS6KC1Q96S38 1066 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 ACO2Q99798 780 aaKnown RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 MARCH5Q9NX47 278 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 KCND2Q9NZV8 630 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 FAM50BQ9Y247 325 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 TNFSF13BQ9Y275 285 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 GDAQ9Y2T3 454 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 PRG3Q9Y2Y8 225 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 SRPRBQ9Y5M8 271 aaKnown RBP14.19□□□□□ -0.14
HDAC1-209ENST00000484305 IRAK3Q9Y616 596 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 ZMYM2Q9UBW7 1377 aa14.19□□□□□ -0.14
HDAC1-209ENST00000484305 FSD2A1L4K1 749 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 PTGESO14684 152 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 RECQL4O94761 1208 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 GRIK3Q13003 919 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
HDAC1-209ENST00000484305 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 TAS1R1Q7RTX1 841 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 TMEM161BQ8NDZ6 487 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 RASSF8Q8NHQ8 419 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 RABGGTAQ92696 567 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 RAD54LQ92698 747 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 REEP2Q9BRK0 252 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 TARS2Q9BW92 718 aaKnown RBP14.18□□□□□ -0.14
HDAC1-209ENST00000484305 MRPL4Q9BYD3 311 aaKnown RBP14.18□□□□□ -0.14
HDAC1-209ENST00000484305 CCSER1Q9C0I3 900 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 PTPRHQ9HD43 1115 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 CACNG4Q9UBN1 327 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 HCFC2Q9Y5Z7 792 aa14.18□□□□□ -0.14
HDAC1-209ENST00000484305 EFEMP2O95967 443 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 SMTNP53814 917 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms