RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PON1P27169 355 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 JAM2P57087 298 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 PEX26Q7Z412 305 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 ARHGAP18Q8N392 663 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 EPS8L3Q8TE67 593 aaKnown RBP12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 HES6Q96HZ4 224 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 KIAA1024Q9UPX6 916 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.434e-8■□□□□ 8.5
SEC61A1-205ENST00000483956 VIL1P09327 827 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 NUDT17P0C025 328 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 ACTN1P12814 892 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 CCDC6Q16204 474 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 EXOC3L4Q17RC7 722 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 NT5DC3Q86UY8 548 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 VPS36Q86VN1 386 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 NEK9Q8TD19 979 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 SNRNP27Q8WVK2 155 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 MXD3Q9BW11 206 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 TBC1D10AQ9BXI6 508 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 MYLK2Q9H1R3 596 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 STOML1Q9UBI4 398 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 AGTP01019 485 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC9A1P19634 815 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 POLD1P28340 1107 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC12A3P55017 1021 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC29A2Q14542 456 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 EPHA7Q15375 998 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 CERKLQ49MI3 558 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 OLFML2BQ68BL8 750 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 DUS1LQ6P1R4 473 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 TSHZ1Q6ZSZ6 1077 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 ABTB1Q969K4 478 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 IGKV6D-41A0A0C4DH26 115 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 RHBDL3P58872 404 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 RTP1P59025 263 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 BTG3Q14201 252 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 UBE2SQ16763 222 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 KHDC1Q4VXA5 237 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 ARSHQ5FYA8 562 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 TPTE2Q6XPS3 522 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 RINLQ6ZS11 566 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 EPM2AIP1Q7L775 607 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 VSIG1Q86XK7 387 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 C17orf50Q8WW18 174 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 JMJD4Q9H9V9 463 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 UTP11Q9Y3A2 253 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 COMMD3-BMI1R4GMX3 469 aa12.37□□□□□ -0.43
SEC61A1-205ENST00000483956 NPHP3-ACAD11A0A0J9YXS1 232 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 POTECB2RU33 542 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 MARCH6O60337 910 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 PPP1R11O60927 126 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 ASLP04424 464 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 ITGA2BP08514 1039 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 PMS2P54278 862 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 WASHC2DQ5SRD0 308 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 SMYD1Q8NB12 490 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 GDAP1Q8TB36 358 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 PABPC3Q9H361 631 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 DCLRE1BQ9H816 532 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 SIX2Q9NPC8 291 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 SUN2Q9UH99 717 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 MROH7Q68CQ1 1323 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 NCANO14594 1321 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 PDXKO00764 312 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 XRCC5P13010 732 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 CREB1P16220 341 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 KNOP1Q1ED39 458 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 COL23A1Q86Y22 540 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 LENG1Q96BZ8 264 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 ERP27Q96DN0 273 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 CORO1BQ9BR76 489 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms