RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 STRNO43815 780 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 ADCY3O60266 1144 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZSCAN20P17040 1043 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 GARTP22102 1010 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 MYH10P35580 1976 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 RFC5P40937 340 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 LIG4P49917 911 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 PTPRJQ12913 1337 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 GRB14Q14449 540 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 PAPD7Q5XG87 772 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 SV2AQ7L0J3 742 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 RSRC2Q7L4I2 434 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 MTERF4Q7Z6M4 381 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 GPD1LQ8N335 351 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 NPLOC4Q8TAT6 608 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 LNX1Q8TBB1 728 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 KCNN1Q92952 543 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 CCDC102AQ96A19 550 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 ANKFY1Q9P2R3 1169 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 CPA4Q9UI42 421 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 IVNS1ABPQ9Y6Y0 642 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 MANSC4A6NHS7 340 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 MSCO60682 206 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 HSPA8P11142 646 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 STAT1P42224 750 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 CAP1Q01518 475 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 LAMTOR4Q0VGL1 99 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 STRN3Q13033 797 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 NOGQ13253 232 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 FAM110CQ1W6H9 321 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 ALKBH5Q6P6C2 394 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 FBXO38Q6PIJ6 1188 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 DPP9Q86TI2 863 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 GLYCTKQ8IVS8 523 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 ABRAQ8N0Z2 381 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 RNF149Q8NC42 400 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 AFG1LQ8WV93 481 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 PSPC1Q8WXF1 523 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 MAML3Q96JK9 1138 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 KREMEN1Q96MU8 473 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 PI4K2AQ9BTU6 479 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 PDE11AQ9HCR9 933 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 TRPC6Q9Y210 931 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 BZW2Q9Y6E2 419 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 DOCK3Q8IZD9 2030 aa9.58□□□□□ -0.88
CDC42SE1-204ENST00000483763 ADGRA2Q96PE1 1338 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 A0A0B4J269 797 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PMM2O15305 246 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 P4HA2O15460 535 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 IQCF3P0C7M6 154 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZNF286BP0CG31 522 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 MAP2K2P36507 400 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PRPF4BQ13523 1007 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 TAF1CQ15572 869 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 NAB2Q15742 525 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 KRT39Q6A163 491 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 UBXN4Q92575 508 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PSMB7Q99436 277 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 BEGAINQ9BUH8 593 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 SMARCAD1Q9H4L7 1026 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 AGO2Q9UKV8 859 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 COQ4Q9Y3A0 265 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 SAR1BQ9Y6B6 198 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 LOC102724159A0A0B4J2E5 919 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZNF233A6NK53 670 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PDE2AO00408 941 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 NCK2O43639 380 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 EXTL3O43909 919 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PIGRP01833 764 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 LGALS2P05162 132 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 SMPD1P17405 629 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 CLCN3P51790 818 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 IGBP1P78318 339 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PWP2Q15269 919 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 C15orf39Q6ZRI6 1047 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 SRGAP1Q7Z6B7 1085 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 RHPN2Q8IUC4 686 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 PPM1KQ8N3J5 372 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 METTL13Q8N6R0 699 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 TRIM58Q8NG06 486 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 HELQQ8TDG4 1101 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 TMC2Q8TDI7 906 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 COG1Q8WTW3 980 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLC20A1Q8WUM9 679 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 TATDN2Q93075 761 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 C16orf70Q9BSU1 422 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 CCDC113Q9H0I3 377 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 GOLPH3Q9H4A6 298 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 MINDY3Q9H8M7 445 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 TMEM8AQ9HCN3 771 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 TAS2R14Q9NYV8 317 aa9.57□□□□□ -0.88
CDC42SE1-204ENST00000483763 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 H0YCG3 227 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms