RNA–Protein interactions for RNA: ENST00000483683.1

COL4A2-208, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-208ENST00000483683 K7ERI5 159 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 NRP1O14786 923 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL4A2-208ENST00000483683 LIG1P18858 919 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
COL4A2-208ENST00000483683 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
COL4A2-208ENST00000483683 TMEM184AQ6ZMB5 413 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 ZBP1Q9H171 429 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
COL4A2-208ENST00000483683 CD320Q9NPF0 282 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 KCND2Q9NZV8 630 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 FAN1Q9Y2M0 1017 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
COL4A2-208ENST00000483683 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
COL4A2-208ENST00000483683 IRAK3Q9Y616 596 aa16.3■□□□□ 0.2
COL4A2-208ENST00000483683 MBTPS2O43462 519 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 CXCL14O95715 111 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 EFEMP2O95967 443 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 CTSAP10619 480 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 PLCG1P19174 1290 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 RAD51AP2Q09MP3 1159 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 DMP1Q13316 513 aaPredicted RBP16.29■□□□□ 0.2
COL4A2-208ENST00000483683 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
COL4A2-208ENST00000483683 KARSQ15046 597 aaKnown RBP16.29■□□□□ 0.2
COL4A2-208ENST00000483683 CLUL1Q15846 466 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
COL4A2-208ENST00000483683 ACO2Q99798 780 aaKnown RBP16.29■□□□□ 0.2
COL4A2-208ENST00000483683 CXCL16Q9H2A7 254 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 PTPRHQ9HD43 1115 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 KMT5AQ9NQR1 393 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 MARCH5Q9NX47 278 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 KLK14Q9P0G3 267 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
COL4A2-208ENST00000483683 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 TNFSF13BQ9Y275 285 aa16.29■□□□□ 0.2
COL4A2-208ENST00000483683 C5orf42Q9H799 3197 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 PHLPP2Q6ZVD8 1323 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 SLC16A4O15374 487 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 PLS3P13797 630 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 NDUFV1P49821 464 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
COL4A2-208ENST00000483683 COASYQ13057 564 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 SMAD2Q15796 467 aaKnown RBP16.28■□□□□ 0.2
COL4A2-208ENST00000483683 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 ATF7IP2Q5U623 682 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 HSCBQ8IWL3 235 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 TMEM161BQ8NDZ6 487 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 AUTS2Q8WXX7 1259 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 KCNN1Q92952 543 aa16.28■□□□□ 0.2
COL4A2-208ENST00000483683 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
COL4A2-208ENST00000483683 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 F8W810 466 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 ABLIM1O14639 778 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 PTGESO14684 152 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 LILRB3O75022 631 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 CLASP2O75122 1294 aaKnown RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 RECQL4O94761 1208 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 PROZP22891 400 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 GRIK3Q13003 919 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 SMAD4Q13485 552 aaKnown RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 MCM6Q14566 821 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 NAB2Q15742 525 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 TMEM132AQ24JP5 1023 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 DCAF4L1Q3SXM0 396 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 GPBP1Q86WP2 473 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 RAD54LQ92698 747 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 CLIC6Q96NY7 704 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 ADPGKQ9BRR6 497 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 TARS2Q9BW92 718 aaKnown RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 KCNG1Q9UIX4 513 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 FAM50BQ9Y247 325 aa16.27■□□□□ 0.2
COL4A2-208ENST00000483683 PRG3Q9Y2Y8 225 aaPredicted RBP16.27■□□□□ 0.2
COL4A2-208ENST00000483683 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.19
COL4A2-208ENST00000483683 MYH11P35749 1972 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
COL4A2-208ENST00000483683 DDIT3P35638 169 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 OR1G1P47890 313 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 ZNF131P52739 623 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 GIT2Q14161 759 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 TAS1R1Q7RTX1 841 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 LARP4BQ92615 738 aaKnown RBP16.26■□□□□ 0.19
COL4A2-208ENST00000483683 REEP2Q9BRK0 252 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 MRPL4Q9BYD3 311 aaKnown RBP16.26■□□□□ 0.19
COL4A2-208ENST00000483683 CDT1Q9H211 546 aa16.26■□□□□ 0.19
COL4A2-208ENST00000483683 STK39Q9UEW8 545 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms