RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DNAJC19Q96DA6 116 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 TMEM175Q9BSA9 504 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 CUEDC2Q9H467 287 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 A0A0C4DFX4 3053 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 MYMKA6NI61 221 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 FSCN2O14926 492 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 ZC3H11AO75152 810 aaKnown RBP eCLIP19.77■□□□□ 0.76
HDAC6-225ENST00000483506 DDHD2O94830 711 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 GALTP07902 379 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 AKAP5P24588 427 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 ABCD1P33897 745 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 PBX3P40426 434 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 ME1P48163 572 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 KRT85P78386 507 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 RNASELQ05823 741 aaKnown RBP19.77■□□□□ 0.76
HDAC6-225ENST00000483506 STRN3Q13033 797 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 RESP18Q5W5W9 173 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 ZPBP2Q6X784 338 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 HAUS6Q7Z4H7 955 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 MYCT1Q8N699 235 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 SLC17A8Q8NDX2 589 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 DDX12PQ92771 950 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 ZFP42Q96MM3 310 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 TARS2Q9BW92 718 aaKnown RBP19.77■□□□□ 0.76
HDAC6-225ENST00000483506 ST6GALNAC4Q9H4F1 302 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 PRDM6Q9NQX0 595 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 TLR9Q9NR96 1032 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 THEGQ9P2T0 379 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 COG5Q9UP83 839 aa19.77■□□□□ 0.76
HDAC6-225ENST00000483506 TCHHQ07283 1943 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 FRMD3A2A2Y4 597 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 TRAK2O60296 914 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 POMCP01189 267 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 SCNN1GP51170 649 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 TCEAL5Q5H9L2 206 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 PDE12Q6L8Q7 609 aaKnown RBP19.76■□□□□ 0.75
HDAC6-225ENST00000483506 COLGALT2Q8IYK4 626 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 PDILTQ8N807 584 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 LEO1Q8WVC0 666 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-225ENST00000483506 APOL6Q9BWW8 343 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 PANK2Q9BZ23 570 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 CDT1Q9H211 546 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 TNMDQ9H2S6 317 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 KBTBD4Q9NVX7 518 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 MIOSQ9NXC5 875 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 SNTG2Q9NY99 539 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 SEL1LQ9UBV2 794 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 DNAJB4Q9UDY4 337 aa19.76■□□□□ 0.75
HDAC6-225ENST00000483506 TOM1L1O75674 476 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 RECQL4O94761 1208 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 PIGRP01833 764 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 MCF2P10911 925 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 IRS1P35568 1242 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 GRM5P41594 1212 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 SLC11A1P49279 550 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 GTF2BQ00403 316 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 KRT17Q04695 432 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 GRIK3Q13003 919 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 MPZL3Q6UWV2 235 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 TMEM173Q86WV6 379 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-225ENST00000483506 FAM178BQ8IXR5 827 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 IQUBQ8NA54 791 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 ATXN2LQ8WWM7 1075 aaKnown RBP19.75■□□□□ 0.75
HDAC6-225ENST00000483506 IGSF21Q96ID5 467 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 MAGEF1Q9HAY2 307 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 PARP2Q9UGN5 583 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 PUF60Q9UHX1 559 aaKnown RBP19.75■□□□□ 0.75
HDAC6-225ENST00000483506 TBX20Q9UMR3 447 aa19.75■□□□□ 0.75
HDAC6-225ENST00000483506 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-225ENST00000483506 K7ENM7 598 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 NCK2O43639 380 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 GAP43P17677 238 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 ERVFC1P60507 584 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 NUCB2P80303 420 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 ZNF568Q3ZCX4 644 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 CNNM4Q6P4Q7 775 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 DYMQ7RTS9 669 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 BCL7CQ8WUZ0 217 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-225ENST00000483506 HLA-CQ95604 372 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 TMEM169Q96HH4 297 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 FAM193BQ96PV7 902 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-225ENST00000483506 SCAND2PQ9GZW5 306 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-225ENST00000483506 FAM13BQ9NYF5 915 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 STK39Q9UEW8 545 aa19.74■□□□□ 0.75
HDAC6-225ENST00000483506 NT5C1B-RDH14C9J2C7 533 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 PTGESO14684 152 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 PPP1R37O75864 691 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 MCL1Q07820 350 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 HYAL1Q12794 435 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 SKIV2LQ15477 1246 aaKnown RBP19.73■□□□□ 0.75
HDAC6-225ENST00000483506 CTC1Q2NKJ3 1217 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 XKR4Q5GH76 650 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 ADALQ6DHV7 355 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 DDX53Q86TM3 631 aaKnown RBP19.73■□□□□ 0.75
HDAC6-225ENST00000483506 SFR1Q86XK3 245 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 MAP4K3Q8IVH8 894 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 PPP2R3CQ969Q6 453 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 CHAMP1Q96JM3 812 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 SPATA32Q96LK8 384 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 PYM1Q9BRP8 204 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms