RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 BMS1Q14692 1282 aaKnown RBP18.23■□□□□ 0.51
VAMP4-204ENST00000482519 NT5DC1Q5TFE4 455 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 EEF1DP3Q658K8 133 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 LLGL2Q6P1M3 1020 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 GPBP1Q86WP2 473 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 TMEM87AQ8NBN3 555 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 EPSTI1Q96J88 318 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 CLIC6Q96NY7 704 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 SNTG2Q9NY99 539 aa18.23■□□□□ 0.51
VAMP4-204ENST00000482519 PRG3Q9Y2Y8 225 aaPredicted RBP18.23■□□□□ 0.51
VAMP4-204ENST00000482519 MYH11P35749 1972 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 CARNS1A5YM72 827 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 GRXCR2A6NFK2 248 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 NRP1O14786 923 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 CXCL14O95715 111 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 PLS3P13797 630 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 IL9P15248 144 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 MCM6Q14566 821 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 DUSP6Q16828 381 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 PUS10Q3MIT2 529 aaKnown RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 USP49Q70CQ1 688 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 DDX53Q86TM3 631 aaKnown RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 AUTS2Q8WXX7 1259 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 USP28Q96RU2 1077 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 TMEM175Q9BSA9 504 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 KCND2Q9NZV8 630 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 FBXO2Q9UK22 296 aaPredicted RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 BARX2Q9UMQ3 279 aaPredicted RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 GDAQ9Y2T3 454 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 SRPRBQ9Y5M8 271 aaKnown RBP18.22■□□□□ 0.51
VAMP4-204ENST00000482519 PHLPP2Q6ZVD8 1323 aa18.22■□□□□ 0.51
VAMP4-204ENST00000482519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 NR1I2O75469 434 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 SMTNP53814 917 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 ARSHQ5FYA8 562 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 APBB1IPQ7Z5R6 666 aaPredicted RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 MRPL43Q8N983 215 aaKnown RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 LRRC15Q8TF66 581 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 RAD54LQ92698 747 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 CDCA3Q99618 268 aaPredicted RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 MRPL4Q9BYD3 311 aaKnown RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 ZHX3Q9H4I2 956 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 C17orf75Q9HAS0 396 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 BLOC1S4Q9NUP1 217 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 TFIP11Q9UBB9 837 aaKnown RBP18.21■□□□□ 0.51
VAMP4-204ENST00000482519 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 CD207Q9UJ71 328 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 FAM50BQ9Y247 325 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 BDP1A6H8Y1 2624 aa18.21■□□□□ 0.51
VAMP4-204ENST00000482519 C2orf71A6NGG8 1288 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 INPPL1O15357 1258 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 RECQL4O94761 1208 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 GLP2RO95838 553 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 TXLNAP40222 546 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 STRN3Q13033 797 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 SLC39A14Q15043 492 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 STK38Q15208 465 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 DCAF4L1Q3SXM0 396 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 COLGALT2Q8IYK4 626 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 GSTCDQ8NEC7 633 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 RABGGTAQ92696 567 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 REEP2Q9BRK0 252 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 TARS2Q9BW92 718 aaKnown RBP18.2■□□□□ 0.5
VAMP4-204ENST00000482519 VN1R3Q9BXE9 311 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 CCSER1Q9C0I3 900 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 TMEM134Q9H6X4 195 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 CLEC1BQ9P126 229 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 ARHGAP28Q9P2N2 729 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 KCNG1Q9UIX4 513 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 NCOR1O75376 2440 aa18.2■□□□□ 0.5
VAMP4-204ENST00000482519 FAM13AO94988 1023 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 SRGAP2BP0DMP2 458 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 OSTNP61366 133 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 DSC1Q08554 894 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 GRIK3Q13003 919 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 TAS1R3Q7RTX0 852 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 KRI1Q8N9T8 703 aaKnown RBP18.19■□□□□ 0.5
VAMP4-204ENST00000482519 VN1R2Q8NFZ6 395 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 ZNF396Q96N95 335 aaPredicted RBP18.19■□□□□ 0.5
VAMP4-204ENST00000482519 ACO2Q99798 780 aaKnown RBP18.19■□□□□ 0.5
VAMP4-204ENST00000482519 PANK2Q9BZ23 570 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 ZBP1Q9H171 429 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 TNFSF13BQ9Y275 285 aa18.19■□□□□ 0.5
VAMP4-204ENST00000482519 FSD2A1L4K1 749 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 F8W810 466 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
VAMP4-204ENST00000482519 CTSAP10619 480 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 HARSP12081 509 aaKnown RBP18.18■□□□□ 0.5
VAMP4-204ENST00000482519 SSTR3P32745 418 aaPredicted RBP18.18■□□□□ 0.5
VAMP4-204ENST00000482519 DDIT3P35638 169 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms