RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 C2orf71A6NGG8 1288 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 NRP1O14786 923 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 GLP2RO95838 553 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 EDN1P05305 212 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
HMGN1-213ENST00000482192 PLS3P13797 630 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 SMTNP53814 917 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 RAD51AP2Q09MP3 1159 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 GRIK3Q13003 919 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 COASYQ13057 564 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
HMGN1-213ENST00000482192 CLUL1Q15846 466 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 GSTCDQ8NEC7 633 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 SPIRE2Q8WWL2 714 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 MSLNLQ96KJ4 702 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 NTPCRQ9BSD7 190 aaKnown RBP13.08□□□□□ -0.32
HMGN1-213ENST00000482192 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
HMGN1-213ENST00000482192 TMEM134Q9H6X4 195 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-213ENST00000482192 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-213ENST00000482192 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
HMGN1-213ENST00000482192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 SFI1A8K8P3 1242 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 CTSAP10619 480 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 PLCG1P19174 1290 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 CA8P35219 290 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 OR1G1P47890 313 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 KCNC3Q14003 757 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 SMAD2Q15796 467 aaKnown RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 EEF1DP3Q658K8 133 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 FAM178BQ8IXR5 827 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 SMRP1Q8NCR6 262 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 VN1R2Q8NFZ6 395 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 CCSER1Q9C0I3 900 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 MIOSQ9NXC5 875 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 KLK14Q9P0G3 267 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 PRKAG3Q9UGI9 489 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 ODF2LQ9ULJ1 636 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 TNFSF13BQ9Y275 285 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 PRG3Q9Y2Y8 225 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
HMGN1-213ENST00000482192 MORC2Q9Y6X9 1032 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-213ENST00000482192 REV3LO60673 3130 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 H0YCG3 227 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 SLC16A4O15374 487 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 MBTPS2O43462 519 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 RECQL4O94761 1208 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 CXCL14O95715 111 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-213ENST00000482192 TXLNAP40222 546 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
HMGN1-213ENST00000482192 STRN3Q13033 797 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 ARSHQ5FYA8 562 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 GPBP1Q86WP2 473 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 RAD54LQ92698 747 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 COLEC11Q9BWP8 271 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 BLOC1S4Q9NUP1 217 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 MARCH5Q9NX47 278 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 CCDC39Q9UFE4 941 aa13.06□□□□□ -0.32
HMGN1-213ENST00000482192 NPHP3-ACAD11A0A0J9YXS1 232 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 CLASP2O75122 1294 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 SOD2P04179 222 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 KRT18P05783 430 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 SCP2P22307 547 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 TUSC3Q13454 348 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 DHX8Q14562 1220 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 PTPN14Q15678 1187 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 TAS1R3Q7RTX0 852 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 ADHFE1Q8IWW8 467 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 GJD3Q8N144 294 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 LRRC15Q8TF66 581 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 AUTS2Q8WXX7 1259 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 LARP4BQ92615 738 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 CASP10Q92851 521 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 EMILIN2Q9BXX0 1053 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 PTPRHQ9HD43 1115 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms