RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CHORDC1Q9UHD1 332 aaPredicted RBP15.64■□□□□ 0.09
CHD3-211ENST00000481999 KIF3CO14782 793 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 OSBPP22059 807 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 ALCAMQ13740 583 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 METTL7BQ6UX53 244 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 GOLGA6L1Q8N7Z2 621 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 PPP1R16BQ96T49 567 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 CCL15-CCL14A0A0B4J2E2 113 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 RNF40O75150 1001 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 PALMO75781 387 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 SOX5P35711 763 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 USP8P40818 1118 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 MXI1P50539 228 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 CCL15Q16663 113 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 ALKBH5Q6P6C2 394 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 TAS1R2Q8TE23 839 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 PARD3BQ8TEW8 1205 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 SPATA33Q96N06 139 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 GPR20Q99678 358 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 TIPINQ9BVW5 301 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 TARS2Q9BW92 718 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 SEPT11Q9NVA2 429 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 SLC25A27O95847 323 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 SYF2O95926 243 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 MYBL2P10244 700 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 NLRP11P59045 1033 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 EPC2Q52LR7 807 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 PNMA8AQ86V59 439 aaPredicted RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 CDR2LQ86X02 465 aaPredicted RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 C12orf56Q8IXR9 622 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 AENQ8WTP8 325 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 U2AF1L4Q8WU68 220 aaKnown RBP15.63■□□□□ 0.09
CHD3-211ENST00000481999 SPIRE2Q8WWL2 714 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 MS4A14Q96JA4 679 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 IFT74Q96LB3 600 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 FAM204AQ9H8W3 233 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 PTPRJQ12913 1337 aa15.63■□□□□ 0.09
CHD3-211ENST00000481999 NOP56O00567 594 aaKnown RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 CSDE1O75534 798 aaKnown RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 TXNP10599 105 aaKnown RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 ABCB4P21439 1286 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 CAPSQ13938 189 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 NEDD9Q14511 834 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 PPM1KQ8N3J5 372 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 DHX38Q92620 1227 aaKnown RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 PTPN18Q99952 460 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 TLR10Q9BXR5 811 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 STK33Q9BYT3 514 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 RNF14Q9UBS8 474 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 ZBTB42B2RXF5 422 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 RPS6KA5O75582 802 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 IVLP07476 585 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 SRGAP2CP0DJJ0 459 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 ADORA2AP29274 412 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 STAT1P42224 750 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 PRPF31Q8WWY3 499 aaKnown RBP15.62■□□□□ 0.09
CHD3-211ENST00000481999 LRRC1Q9BTT6 524 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 FBXL5Q9UKA1 691 aa15.62■□□□□ 0.09
CHD3-211ENST00000481999 DOCK3Q8IZD9 2030 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 PRKCIP41743 596 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 LIG4P49917 911 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 TARBP2Q15633 366 aaKnown RBP15.61■□□□□ 0.09
CHD3-211ENST00000481999 CELF3Q5SZQ8 465 aaKnown RBP15.61■□□□□ 0.09
CHD3-211ENST00000481999 ARMCX2Q7L311 632 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 GSPT2Q8IYD1 628 aaKnown RBP15.61■□□□□ 0.09
CHD3-211ENST00000481999 TMEM130Q8N3G9 435 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 AFAP1L1Q8TED9 768 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 ZNF516Q92618 1163 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 KREMEN1Q96MU8 473 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 EVPLQ92817 2033 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.61■□□□□ 0.09
CHD3-211ENST00000481999 DKC1O60832 514 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHD3-211ENST00000481999 CELF2O95319 508 aaKnown RBP15.61■□□□□ 0.09
CHD3-211ENST00000481999 IGBP1P78318 339 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 NAB2Q15742 525 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 CCDC62Q6P9F0 684 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 DHX37Q8IY37 1157 aaKnown RBP15.61■□□□□ 0.09
CHD3-211ENST00000481999 GDAP1L1Q96MZ0 367 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 RNPEPQ9H4A4 650 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 PLEKHA4Q9H4M7 779 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 OSGEPQ9NPF4 335 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 EXOC7Q9UPT5 735 aa15.61■□□□□ 0.09
CHD3-211ENST00000481999 GRID2IPA4D2P6 1211 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 ARL2P36404 184 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 MATR3P43243 847 aaKnown RBP eCLIP15.6■□□□□ 0.093e-8■■■□□ 14.8
CHD3-211ENST00000481999 CYP24A1Q07973 514 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 MYBPC2Q14324 1141 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 CFAP221Q4G0U5 840 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 GLE1Q53GS7 698 aaKnown RBP15.6■□□□□ 0.09
CHD3-211ENST00000481999 SV2AQ7L0J3 742 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 DEPTORQ8TB45 409 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 TATDN2Q93075 761 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 NIFKQ9BYG3 293 aaKnown RBP15.6■□□□□ 0.09
CHD3-211ENST00000481999 AZI2Q9H6S1 392 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 STIM2Q9P246 746 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms